RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 NDUFAF6Q330K2 333 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 AADACL4Q5VUY2 407 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 GNPDA2Q8TDQ7 276 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 TRUB1Q8WWH5 349 aaKnown RBP11.11□□□□□ -0.63
PRPF39-203ENST00000477626 C3orf49Q96BT1 292 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 GFM1Q96RP9 751 aaKnown RBP11.11□□□□□ -0.63
PRPF39-203ENST00000477626 EGLN3Q9H6Z9 239 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 C12orf10Q9HB07 376 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 MCCC2Q9HCC0 563 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 ERVK-18Q9QC07 812 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 SIGLEC7Q9Y286 467 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 A0A087WUJ7 227 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 SH3D21A4FU49 640 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 NHLRC1Q6VVB1 395 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 SZRD1Q7Z422 152 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 CACTIN-AS1Q8N1I8 211 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 B3GNT7Q8NFL0 401 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 ARSGQ96EG1 525 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 FANCEQ9HB96 536 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 ACOT13Q9NPJ3 140 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 A0A1B0GWA3 101 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 TMEM247A6NEH6 219 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 IDSB3KWA1 339 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 ICOSLGO75144 302 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 CDK1P06493 297 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 DUSP3P51452 185 aaPredicted RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 RNF4P78317 190 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 KRT80Q6KB66 452 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 NAXDQ8IW45 347 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 DGCR14Q96DF8 476 aaKnown RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 HSPBAP1Q96EW2 488 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 GPX7Q96SL4 187 aaPredicted RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 PROK2Q9HC23 129 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 RARRES3Q9UL19 164 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 OR6C70A6NIJ9 312 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 CLCA1A8K7I4 914 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 MEN1O00255 615 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 UTS2O95399 124 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 ANGPTL1O95841 491 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 POU2F1P14859 743 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 ARHGAP40Q5TG30 622 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 H3F3CQ6NXT2 135 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 CBLN3Q6UW01 205 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 PPP1R3BQ86XI6 285 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 FNDC11Q9BVV2 318 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 DDA1Q9BW61 102 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 Q9N2J8 555 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 CNOT2Q9NZN8 540 aaKnown RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 ALOX12BO75342 701 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 HBQ1P09105 142 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 STAT5AP42229 794 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 GIPRP48546 466 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 CSNK2BP67870 215 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 TUBA3CQ13748 450 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 SYT14P1Q58G82 188 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 MFSD4BQ5TF39 518 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 RBM44Q6ZP01 1051 aaKnown RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 TIPARPQ7Z3E1 657 aaKnown RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 FAM46AQ96IP4 442 aaKnown RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 CCNL2Q96S94 520 aaPredicted RBP11.1□□□□□ -0.63
PRPF39-203ENST00000477626 APOL4Q9BPW4 351 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 MKL2Q9ULH7 1088 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 PCDHGA3Q9Y5H0 932 aa11.1□□□□□ -0.63
PRPF39-203ENST00000477626 C9orf172C9J069 976 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 CPNE3O75131 537 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 LDOC1O95751 146 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ALAS2P22557 587 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF117Q03924 483 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 NSDHLQ15738 373 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 THSD4Q6ZMP0 1018 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 MEX3DQ86XN8 651 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 SLC34A3Q8N130 599 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 CCDC182A6NF36 153 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 TMX2-CTNND1H3BSU7 103 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 POLR1CO15160 346 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ATP6V1B1P15313 513 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 FUT1P19526 365 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 GSTM3P21266 225 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 PSMD4P55036 377 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 LTBQ06643 244 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 TBCEQ15813 527 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 NRMQ8IXM6 262 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 GPR135Q8IZ08 494 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 EXD3Q8N9H8 876 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF420Q8TAQ5 688 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 IPCEF1Q8WWN9 437 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ISOC1Q96CN7 298 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 PTDSS2Q9BVG9 487 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 B3GNT4Q9C0J1 378 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 LAT2Q9GZY6 243 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 HOXD1Q9GZZ0 328 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 UBQLN4Q9NRR5 601 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 CNIH4Q9P003 139 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 NDUFA13Q9P0J0 144 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 SLC35A3Q9Y2D2 325 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 542.2 ms