RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PVRP15151 417 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 TMEM11P17152 192 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 SLC6A11P48066 632 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 PPP5CP53041 499 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 ARL6IP1Q15041 203 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 TMEFF1Q8IYR6 380 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 ZNF679Q8IYX0 411 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 DEDD2Q8WXF8 326 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 TOPAZ1Q8N9V7 1692 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 GOLGA4Q13439 2230 aaKnown RBP17.46■□□□□ 0.39
VARS2-209ENST00000477288 CENPBD1B2RD01 187 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 SERPINA2P20848 420 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 NOVP48745 357 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 PIP5KL1Q5T9C9 394 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 STEAP4Q687X5 459 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 NCCRP1Q6ZVX7 275 aaPredicted RBP17.46■□□□□ 0.39
VARS2-209ENST00000477288 CYP4V2Q6ZWL3 525 aaPredicted RBP17.46■□□□□ 0.39
VARS2-209ENST00000477288 MFSD6LQ8IWD5 586 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 OR7G3Q8NG95 312 aa17.46■□□□□ 0.39
VARS2-209ENST00000477288 ZNF578Q96N58 590 aaPredicted RBP17.46■□□□□ 0.39
VARS2-209ENST00000477288 BOLA2-SMG1P6H3BVE0 249 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 TSFMP43897 325 aaKnown RBP17.46■□□□□ 0.38
VARS2-209ENST00000477288 HLCSP50747 726 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 CNN3Q15417 329 aaKnown RBP17.46■□□□□ 0.38
VARS2-209ENST00000477288 MORN1Q5T089 497 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 LETMD1Q6P1Q0 360 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 FBXW12Q6X9E4 464 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 PARS2Q7L3T8 475 aaKnown RBP17.46■□□□□ 0.38
VARS2-209ENST00000477288 GPR26Q8NDV2 337 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 ARL11Q969Q4 196 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 NEIL2Q969S2 332 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 ADOQ96SZ5 270 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 PINK1Q9BXM7 581 aa17.46■□□□□ 0.38
VARS2-209ENST00000477288 ANTXRLA6NF34 631 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 ARSBP15848 533 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CD38P28907 300 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 GLO1Q04760 184 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 AARDQ4LEZ3 155 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 ENDOVQ8N8Q3 282 aaKnown RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 ACOT4Q8N9L9 421 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CASD1Q96PB1 797 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 PRMT8Q9NR22 394 aaPredicted RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 CDC14CA4D256 554 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 MMP2P08253 660 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CD46P15529 392 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 IDUAP35475 653 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 SSTP61278 116 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 RPL23AP62750 156 aaKnown RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 ERV3-1Q14264 604 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 SLC39A11Q8N1S5 342 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 GPR148Q8TDV2 347 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 TMEM239Q8WW34 195 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 HLA-CQ95604 372 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CPNE7Q9UBL6 633 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 ZNF736B4DX44 427 aaPredicted RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 EIF3FO00303 357 aaPredicted RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 PRKAR1BP31321 381 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CYCSP99999 105 aaKnown RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 FAM43BQ6ZT52 329 aaPredicted RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 TAS1R1Q7RTX1 841 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CA5BQ9Y2D0 317 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 LOC102725191A0A1B0GVB3 256 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 LYRM1O43325 122 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 PRICKLE3O43900 615 aaPredicted RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 FOSL1P15407 271 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 VASPP50552 380 aaPredicted RBP17.45■□□□□ 0.38
VARS2-209ENST00000477288 TCEAL1Q15170 157 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CD200R1Q8TD46 325 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 PIGCQ92535 297 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 SNAPC3Q92966 411 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 GPR160Q9UJ42 338 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 SLC6A14Q9UN76 642 aa17.45■□□□□ 0.38
VARS2-209ENST00000477288 CD63P08962 238 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 PKDCCQ504Y2 493 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 IL20RBQ6UXL0 311 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 FNDC9Q8TBE3 224 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 RNF128Q8TEB7 428 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 HAS2Q92819 552 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 HYLS1Q96M11 299 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 HAPLN2Q9GZV7 340 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 HIPK2Q9H2X6 1198 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 PLCXD1Q9NUJ7 323 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 A0A1W2PPV4 95 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 ARAFP10398 606 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 C7P10643 843 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 NDNFQ8TB73 568 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 DAZAP1Q96EP5 407 aaKnown RBP17.44■□□□□ 0.38
VARS2-209ENST00000477288 LHPPQ9H008 270 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 GPN2Q9H9Y4 310 aaPredicted RBP17.44■□□□□ 0.38
VARS2-209ENST00000477288 BIN3Q9NQY0 253 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 HSPE1-MOB4S4R3N1 261 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 TAS2R31P59538 309 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 SLC22A6Q4U2R8 563 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 EXOSC6Q5RKV6 272 aaKnown RBP17.44■□□□□ 0.38
VARS2-209ENST00000477288 SCD5Q86SK9 330 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 ELMOD3Q96FG2 381 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 GPATCH2Q9NW75 528 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 CHATP28329 748 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 CD68P34810 354 aaPredicted RBP17.44■□□□□ 0.38
VARS2-209ENST00000477288 SLX4IPQ5VYV7 408 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms