RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 CPNE4Q96A23 557 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-219ENST00000476625 L3HYPDHQ96EM0 354 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 GRPEL1Q9HAV7 217 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 C3orf14Q9HBI5 128 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 LRTM1Q9HBL6 345 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 FANCFQ9NPI8 374 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 SIRT3Q9NTG7 399 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-219ENST00000476625 PAQR5Q9NXK6 330 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-219ENST00000476625 GIMAP2Q9UG22 337 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 FIS1Q9Y3D6 152 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 CCL27Q9Y4X3 112 aa10.56□□□□□ -0.72
HDAC6-219ENST00000476625 CENPVL1A0A0U1RR11 272 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 G3V2L1 256 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 SCDO00767 359 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 PRKD3O94806 890 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 YES1P07947 543 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 NGFRP08138 427 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 PRKCAP17252 672 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 SDC1P18827 310 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 TTKP33981 857 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 NTF4P34130 210 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 PKNOX1P55347 436 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 VLDLRP98155 873 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 CHRNEQ04844 493 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 RNPS1Q15287 305 aaKnown RBP10.55□□□□□ -0.72
HDAC6-219ENST00000476625 EXOSC6Q5RKV6 272 aaKnown RBP10.55□□□□□ -0.72
HDAC6-219ENST00000476625 PDSS1Q5T2R2 415 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 C9orf135Q5VTT2 229 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 CDC73Q6P1J9 531 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 CLEC2AQ6UVW9 174 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 LRIG3Q6UXM1 1119 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 DNAJC14Q6Y2X3 702 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-219ENST00000476625 Q6ZT83 130 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 MMGT1Q8N4V1 131 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 COX18Q8N8Q8 333 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 CDRT4Q8N9R6 151 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 ACTRT2Q8TDY3 377 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 C10orf105Q8TEF2 133 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 IFT81Q8WYA0 676 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 C3orf49Q96BT1 292 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 CHMP6Q96FZ7 201 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 C1orf159Q96HA4 380 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 REXO5Q96IC2 774 aaKnown RBP10.55□□□□□ -0.72
HDAC6-219ENST00000476625 MS4A4EQ96PG1 132 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 SOX7Q9BT81 388 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 HDHD5Q9BXW7 423 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 BARX1Q9HBU1 254 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-219ENST00000476625 STOML1Q9UBI4 398 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 CDC42EP3Q9UKI2 254 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 ICAM5Q9UMF0 924 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 TRAF6Q9Y4K3 522 aa10.55□□□□□ -0.72
HDAC6-219ENST00000476625 SERTM1A2A2V5 107 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 NPIPB8E9PQR5 432 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 M0R1B8 84 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 WIPF1O43516 503 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 SEC22BO75396 215 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 SLITRK5O94991 958 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 SNRPAP09012 282 aaKnown RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 ALOX5P09917 674 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 HPGDP15428 266 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 COX5AP20674 150 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 CASQ1P31415 396 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 POU6F2P78424 691 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 SLC25A3Q00325 362 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 LOXL1Q08397 574 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 RASGEF1BQ0VAM2 473 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 LASP1Q14847 261 aaKnown RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 GTF2IRD2BQ6EKJ0 949 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 Q6ZSR9 355 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 ZNF572Q7Z3I7 529 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 GTF2IRD2Q86UP8 949 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 TDRPQ86YL5 185 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 TMCO5AQ8N6Q1 288 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 ZNF433Q8N7K0 673 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 ZNF614Q8N883 585 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 NOA1Q8NC60 698 aaKnown RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 GPR119Q8TDV5 335 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 FAM120BQ96EK7 910 aaKnown RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 ADAD1Q96M93 576 aaKnown RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 SHARPINQ9H0F6 387 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 BCO1Q9HAY6 547 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 EML4Q9HC35 981 aaKnown RBP10.54□□□□□ -0.72
HDAC6-219ENST00000476625 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 UBQLN4Q9NRR5 601 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 CBLN4Q9NTU7 201 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 SH3BP4Q9P0V3 963 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 ZNF180Q9UJW8 692 aa10.54□□□□□ -0.72
HDAC6-219ENST00000476625 EXOC1LA0A1B0GW35 172 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 A0A1W2PQD3 144 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 ELOA3DA6NLF2 546 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-219ENST00000476625 ESPNB1AK53 854 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 LMX1BO60663 402 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 BCAS1O75363 584 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-219ENST00000476625 RSL1D1O76021 490 aaKnown RBP10.53□□□□□ -0.72
HDAC6-219ENST00000476625 HMGN2P05204 90 aaKnown RBP10.53□□□□□ -0.72
HDAC6-219ENST00000476625 FESP07332 822 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 PYGBP11216 843 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 GGT1P19440 569 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 ELK4P28324 431 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms