RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ME2P23368 584 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 ELK4P28324 431 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 CCKARP32238 428 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 KCNJ5P48544 419 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 RNF144AP50876 292 aaPredicted RBP9.66□□□□□ -0.86
SEC13-214ENST00000476597 SUMO3P55854 103 aaPredicted RBP9.66□□□□□ -0.86
SEC13-214ENST00000476597 CARD18P57730 90 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 RPS26P62854 115 aaKnown RBP9.66□□□□□ -0.86
SEC13-214ENST00000476597 FOXF1Q12946 379 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 KEAP1Q14145 624 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 TOMM34Q15785 309 aaPredicted RBP9.66□□□□□ -0.86
SEC13-214ENST00000476597 ZNF141Q15928 474 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 DEFB113Q30KQ7 82 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 SLC25A53Q5H9E4 307 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 ANXA8L1Q5VT79 327 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 HBMQ6B0K9 141 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 GTF2IRD2BQ6EKJ0 949 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 PPP4R4Q6NUP7 873 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 GTF2IRD2Q86UP8 949 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 CLEC4FQ8N1N0 589 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 OR6K3Q8NGY3 331 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 FBXO27Q8NI29 283 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 MIPOL1Q8TD10 442 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 TESCQ96BS2 214 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 ZBTB9Q96C00 473 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 ZNF524Q96C55 264 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 ARSGQ96EG1 525 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 KLHL15Q96M94 604 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 MED18Q9BUE0 208 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 NUF2Q9BZD4 464 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 NMUR2Q9GZQ4 415 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 TMEM185BQ9H7F4 350 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 PNPOQ9NVS9 261 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 KLHL28Q9NXS3 571 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 ZNF226Q9NYT6 803 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 C6orf203Q9P0P8 240 aaPredicted RBP9.66□□□□□ -0.86
SEC13-214ENST00000476597 KCNE5Q9UJ90 142 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 CLEC4AQ9UMR7 237 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 PCDHGB4Q9UN71 923 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 EMC9Q9Y3B6 208 aa9.66□□□□□ -0.86
SEC13-214ENST00000476597 GPC6Q9Y625 555 aaPredicted RBP9.66□□□□□ -0.86
SEC13-214ENST00000476597 MED12LQ86YW9 2145 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 SERINC4A6NH21 518 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 ESPNB1AK53 854 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 ZNF264O43296 627 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 DNAJA2O60884 412 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 NTN1O95631 604 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 NUDT14O95848 222 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 PLGP00747 810 aaPredicted RBP9.65□□□□□ -0.86
SEC13-214ENST00000476597 GUSBP08236 651 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 PABPC4LP0CB38 370 aaKnown RBP9.65□□□□□ -0.86
SEC13-214ENST00000476597 PRKCAP17252 672 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 LBPP18428 481 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 KLK2P20151 261 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 UQCRC2P22695 453 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 SHC1P29353 583 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 SOAT1P35610 550 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 CTBP2P56545 445 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 ADAM8P78325 824 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 BST1Q10588 318 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 CASP8Q14790 479 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 NDUFAF6Q330K2 333 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 ARHGAP11BQ3KRB8 267 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 TMEM176BQ3YBM2 270 aaPredicted RBP9.65□□□□□ -0.86
SEC13-214ENST00000476597 PDZK1Q5T2W1 519 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 HEPHL1Q6MZM0 1159 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 VPS37AQ8NEZ2 397 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 OR4A15Q8NGL6 344 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 OR5W2Q8NH69 310 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 MARK4Q96L34 752 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 MRGPRX4Q96LA9 322 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 KLHL4Q9C0H6 718 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 LAT2Q9GZY6 243 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 MEAF6Q9HAF1 191 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 TIGARQ9NQ88 270 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 MED13LQ71F56 2210 aa9.65□□□□□ -0.86
SEC13-214ENST00000476597 PCNX3Q9H6A9 2034 aa9.65□□□□□ -0.87
SEC13-214ENST00000476597 RNF103-CHMP3A0A140T963 221 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 GJE1A6NN92 205 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 STX11O75558 287 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 UGT2B17O75795 530 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 CPSF4O95639 269 aaKnown RBP9.64□□□□□ -0.87
SEC13-214ENST00000476597 AGR2O95994 175 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 OR12D1P0DN82 309 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 PPP3CBP16298 524 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 HOXC12P31275 282 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 SFTPDP35247 375 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 CLNS1AP54105 237 aaKnown RBP9.64□□□□□ -0.87
SEC13-214ENST00000476597 WDR4P57081 412 aaKnown RBP9.64□□□□□ -0.87
SEC13-214ENST00000476597 PPP2R2AP63151 447 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 CBFBQ13951 182 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 GPR68Q15743 365 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 ZNF239Q16600 458 aaKnown RBP9.64□□□□□ -0.87
SEC13-214ENST00000476597 EXOC3L2Q2M3D2 409 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 DPY19L1Q2PZI1 675 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 SPANXN4Q5MJ08 99 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 HHATQ5VTY9 493 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 ANKRD34AQ69YU3 496 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 OGFOD2Q6N063 350 aa9.64□□□□□ -0.87
SEC13-214ENST00000476597 STAC2Q6ZMT1 411 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms