RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TGM7Q96PF1 710 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 OR5B2Q96R09 309 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 APMAPQ9HDC9 416 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 DPM3Q9P2X0 92 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 PCSK1NQ9UHG2 260 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 NPIPA1Q9UND3 350 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 SCML2Q9UQR0 700 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 ANKRD30BQ9BXX2 1392 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 C15orf38-AP3S2A0A0A6YYH1 394 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 METTL21EPA6NDL7 271 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 ZNF705EA8MWA4 302 aaPredicted RBP4.44□□□□□ -1.7
VPS50-212ENST00000476413 FCN1O00602 326 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 TAPBPO15533 448 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 CAPN1P07384 714 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 PCMT1P22061 227 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 MMP11P24347 488 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 GDF1P27539 372 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 MRPS11P82912 194 aaKnown RBP4.44□□□□□ -1.7
VPS50-212ENST00000476413 MAP2K1Q02750 393 aaPredicted RBP4.44□□□□□ -1.7
VPS50-212ENST00000476413 ELAVL3Q14576 367 aaKnown RBP4.44□□□□□ -1.7
VPS50-212ENST00000476413 UTF1Q5T230 341 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 ZNF774Q6NX45 483 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 KCNIP4Q6PIL6 250 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 VSTM4Q8IW00 320 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 SLC39A11Q8N1S5 342 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 OR10A7Q8NGE5 316 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 OR51G2Q8NGK0 314 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 RHOXF1Q8NHV9 184 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 C7orf34Q96L11 122 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 SIGLEC12Q96PQ1 595 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 OR5M11Q96RB7 305 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 CYP2S1Q96SQ9 504 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 MCHR1Q99705 422 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 UFSP2Q9NUQ7 469 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 SMOXQ9NWM0 555 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 B3GNT2Q9NY97 397 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 ZNF107Q9UII5 783 aaPredicted RBP4.44□□□□□ -1.7
VPS50-212ENST00000476413 ALG6Q9Y672 507 aa4.44□□□□□ -1.7
VPS50-212ENST00000476413 CABYRO75952 493 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 OTUD4Q01804 1114 aaKnown RBP4.43□□□□□ -1.7
VPS50-212ENST00000476413 C1orf61Q13536 156 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 CUL1Q13616 776 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 MOB3BQ86TA1 216 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 CNPY4Q8N129 248 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 KIR3DL3Q8N743 410 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 CATSPER1Q8NEC5 780 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 MRAPQ8TCY5 172 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 SLC41A3Q96GZ6 507 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 SECISBP2Q96T21 854 aaKnown RBP4.43□□□□□ -1.7
VPS50-212ENST00000476413 PYGO2Q9BRQ0 406 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 PAXXQ9BUH6 204 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 VCX2Q9H322 139 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 SLC17A5Q9NRA2 495 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 IL36GQ9NZH8 169 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 PTBP2Q9UKA9 531 aaKnown RBP4.43□□□□□ -1.7
VPS50-212ENST00000476413 MEMO1Q9Y316 297 aa4.43□□□□□ -1.7
VPS50-212ENST00000476413 IGHV2-70DA0A0C4DH43 119 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 ZNF254O75437 659 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 ZNF44P15621 663 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 SERPINA2P20848 420 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 CASP4P49662 377 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 RPL32P62910 135 aaKnown RBP4.42□□□□□ -1.7
VPS50-212ENST00000476413 CD47Q08722 323 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 PRR4Q16378 134 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 SLC25A52Q3SY17 297 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 LRRC23Q53EV4 343 aaPredicted RBP4.42□□□□□ -1.7
VPS50-212ENST00000476413 CEP55Q53EZ4 464 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 TP53I3Q53FA7 332 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 TMEM225Q6GV28 225 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 CXCL17Q6UXB2 119 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 SYT10Q6XYQ8 523 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 C16orf62Q7Z3J2 963 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 C17orf82Q86X59 251 aaPredicted RBP4.42□□□□□ -1.7
VPS50-212ENST00000476413 HAVCR1Q96D42 359 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 COQ2Q96H96 371 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 MAGT1Q9H0U3 335 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 NXF5Q9H1B4 397 aaKnown RBP4.42□□□□□ -1.7
VPS50-212ENST00000476413 RHBGQ9H310 441 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 AIPL1Q9NZN9 384 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 LCMT1Q9UIC8 334 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 RPH3ALQ9UNE2 315 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 ASB3Q9Y575 518 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 MAD1L1Q9Y6D9 718 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 SLCO1B1Q9Y6L6 691 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 FRMPD3Q5JV73 1810 aa4.42□□□□□ -1.7
VPS50-212ENST00000476413 LRP5LA4QPB2 252 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 TPST2O60704 377 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 IGHG4P01861 327 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 GCFC2P16383 781 aaKnown RBP4.41□□□□□ -1.7
VPS50-212ENST00000476413 ADORA2BP29275 332 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 RPL29P47914 159 aaKnown RBP4.41□□□□□ -1.7
VPS50-212ENST00000476413 MEOX2P50222 304 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 HSPA2P54652 639 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 OC90Q02509 493 aaPredicted RBP4.41□□□□□ -1.7
VPS50-212ENST00000476413 PDK3Q15120 406 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 SBK1Q52WX2 424 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 BAIAP2L2Q6UXY1 529 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 OR13F1Q8NGS4 319 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 ANKRD9Q96BM1 317 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms