RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CILP2Q8IUL8 1156 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 OR2T4Q8NH00 348 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 SLC5A11Q8WWX8 675 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 NTAN1Q96AB6 310 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 TSGA13Q96PP4 275 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 RTP3Q9BQQ7 232 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PAPOLGQ9BWT3 736 aaKnown RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 HIPK2Q9H2X6 1198 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 CERS4Q9HA82 394 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 KLHL9Q9P2J3 617 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 ACSL6Q9UKU0 697 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 MYBPHLA2RUH7 354 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 GGT3PA6NGU5 568 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 ZNF98A6NK75 572 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 FAM157BP0CG42 384 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 C8orf89P0DMQ9 161 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 CKMT1AP12532 417 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 ETV5P41161 510 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PREPP48147 710 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 GPR85P60893 370 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 CHRNA6Q15825 494 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 TMEM35AQ53FP2 167 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 OR8K5Q8NH50 307 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 TOMM40LQ969M1 308 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 MSLNLQ96KJ4 702 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 OR1F2PQ96R84 312 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 C1QTNF6Q9BXI9 259 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 SLC6A13Q9NSD5 602 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 C6orf47O95873 294 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 APOA2P02652 100 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PROS1P07225 676 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 JMJD7P0C870 316 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 IL1RNP18510 177 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 ACVR1BP36896 505 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 UBE2NP61088 152 aaKnown RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 RPS24P62847 133 aaKnown RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 TIAL1Q01085 375 aaKnown RBP eCLIP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 SPOCK1Q08629 439 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 CCINQ13939 588 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 CLLU1Q5K131 121 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 C22orf42Q6IC83 251 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 ZNF695Q8IW36 515 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 OR4E2Q8NGC2 313 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 OR6C4Q8NGE1 309 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 OR9K2Q8NGE7 335 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 RBPMSQ93062 196 aaKnown RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 NAA11Q9BSU3 229 aaPredicted RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 MFFQ9GZY8 342 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 TSPAN10Q9H1Z9 355 aaPredicted RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 RHCGQ9UBD6 479 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 NUPL2O15504 423 aaKnown RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 LPLP06858 475 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 TPMTP51580 245 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 CSNK2A1P68400 391 aaPredicted RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 SEMG2Q02383 582 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 EXOSC2Q13868 293 aaKnown RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PEA15Q15121 130 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PTPRRQ15256 657 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 CSNK2A3Q8NEV1 391 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PPTC7Q8NI37 304 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 SLC2A12Q8TD20 617 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 KCTD13Q8WZ19 329 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 RADILQ96JH8 1075 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 BTF3L4Q96K17 158 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PTCHD1Q96NR3 888 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 PELOQ9BRX2 385 aaKnown RBP10.85□□□□□ -0.67
U2AF1-209ENST00000475639 SCN1AP35498 2009 aa10.85□□□□□ -0.67
U2AF1-209ENST00000475639 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 KLRG2A4D1S0 409 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 FAM221BA6H8Z2 402 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 OR51F1A6NGY5 319 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 AGPAT2O15120 278 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 MTX2O75431 263 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TPOP07202 933 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ATP1B2P14415 290 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 NDUFV2P19404 249 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 SCNN1AP37088 669 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 EPHA5P54756 1037 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ERVK-25P63136 954 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 RPP30P78346 268 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 LRRC73Q5JTD7 316 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TMPRSS7Q7RTY8 843 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 OR1S1Q8NH92 325 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 SPRYD4Q8WW59 207 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 BMFQ96LC9 184 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 LINC00052Q96N35 136 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 OPALINQ96PE5 141 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TCEAL2Q9H3H9 227 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 SCML2Q9UQR0 700 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 LSM5Q9Y4Y9 91 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 HRH3Q9Y5N1 445 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 CSNK1G3Q9Y6M4 447 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 UBR3Q6ZT12 1888 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TRAV18A0A075B6X5 111 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 YJEFN3A6XGL0 299 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 D6RAR5 112 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms