RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CBWD2Q8IUF1 395 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 TRMT10AQ8TBZ6 339 aaKnown RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 PNPT1Q8TCS8 783 aaKnown RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 SETD7Q8WTS6 366 aaKnown RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 SLC41A3Q96GZ6 507 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 NDUFAF3Q9BU61 184 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 RPAP3Q9H6T3 665 aaPredicted RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 DDX18Q9NVP1 670 aaKnown RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 HYPKQ9NX55 129 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 RNF14Q9UBS8 474 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 OR10H1Q9Y4A9 318 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 FAM25EA8MYX2 175 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 SNNO75324 88 aaPredicted RBP4.32□□□□□ -1.72
SMC5-203ENST00000475540 NDUFA7O95182 113 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 MBD3O95983 291 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 GZMAP12544 262 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 SDC1P18827 310 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 RGS4P49798 205 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 DIO3P55073 304 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 CNTN2Q02246 1040 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 ZSWIM7Q19AV6 140 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 RABGAP1LQ5R372 815 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 SLC39A4Q6P5W5 647 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 ANGPTL8Q6UXH0 198 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 TFAP2EQ6VUC0 442 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 GOLGA7Q7Z5G4 137 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 LHFPL4Q7Z7J7 247 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 AKR7LQ8NHP1 331 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 TCEANC2Q96MN5 208 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 TECTBQ96PL2 329 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 TSSK1BQ9BXA7 367 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 ISG20L2Q9H9L3 353 aaKnown RBP4.32□□□□□ -1.72
SMC5-203ENST00000475540 ELOVL2Q9NXB9 296 aa4.32□□□□□ -1.72
SMC5-203ENST00000475540 USP6P35125 1406 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 KANK1Q14678 1352 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 CARMIL1Q5VZK9 1371 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 RAI1Q7Z5J4 1906 aaPredicted RBP4.31□□□□□ -1.72
SMC5-203ENST00000475540 GRIN2DO15399 1336 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 PPIAL4DF5H284 164 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 STK17BO94768 372 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 ASGR1P07306 291 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 GALP22466 123 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 PAX7P23759 505 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 CA8P35219 290 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 UGT1A3P35503 534 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 TNNT2P45379 298 aaPredicted RBP4.31□□□□□ -1.72
SMC5-203ENST00000475540 STK19P49842 368 aaPredicted RBP4.31□□□□□ -1.72
SMC5-203ENST00000475540 SLC26A2P50443 739 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 PPT1P50897 306 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 RPS8P62241 208 aaKnown RBP4.31□□□□□ -1.72
SMC5-203ENST00000475540 SELPLGQ14242 412 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 RAB35Q15286 201 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 RCN1Q15293 331 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 KYAT1Q16773 422 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 EXOC3L2Q2M3D2 409 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 ZNF699Q32M78 642 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 ZNF528Q3MIS6 628 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 NT5C3BQ969T7 300 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 SLC25A38Q96DW6 304 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 IMMP1LQ96LU5 166 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 VSTM2LQ96N03 204 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 SDHCQ99643 169 aaPredicted RBP4.31□□□□□ -1.72
SMC5-203ENST00000475540 FN3KRPQ9HA64 309 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 FAM114A2Q9NRY5 505 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 DCAF13Q9NV06 445 aaKnown RBP4.31□□□□□ -1.72
SMC5-203ENST00000475540 RAB20Q9NX57 234 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 MBD2Q9UBB5 411 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 B9D1Q9UPM9 204 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 SLCO1B1Q9Y6L6 691 aa4.31□□□□□ -1.72
SMC5-203ENST00000475540 PARD3Q8TEW0 1356 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 FAM240BA0A1B0GVZ2 78 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 GSAPA4D1B5 854 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 RNF222A6NCQ9 220 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 WASH3PC4AMC7 463 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 H0YIV9 168 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 SDHDO14521 159 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 ZNF208O43345 1280 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 BCAS1O75363 584 aaPredicted RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 ECI2O75521 394 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 UFL1O94874 794 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 IGLV1-47P01700 117 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 ZNF44P15621 663 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 NCF2P19878 526 aaPredicted RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 PSMA2P25787 234 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 OR3A4PP47883 348 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 PRRX1P54821 245 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 RPL23AP62750 156 aaKnown RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 HERVK_113P63132 956 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 ERVK-8P63133 956 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 NCBP1Q09161 790 aaKnown RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 EIF4EBP2Q13542 120 aaPredicted RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 HSP90AB3PQ58FF7 597 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 BEND6Q5SZJ8 279 aaPredicted RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 WASH2PQ6VEQ5 465 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 NBPF5PQ86XG9 351 aaPredicted RBP4.3□□□□□ -1.72
SMC5-203ENST00000475540 C9orf40Q8IXQ3 194 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 AGR3Q8TD06 166 aa4.3□□□□□ -1.72
SMC5-203ENST00000475540 ZNF75CPQ92670 426 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms