RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 DSPPQ9NZW4 1301 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 POLEQ07864 2286 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 AHRRA9YTQ3 701 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 KDM4EB2RXH2 506 aaPredicted RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 C5orf58C9J3I9 102 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 FAM47E-STBD1D6RA91 191 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 H3BML4 177 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 DBIP07108 87 aaKnown RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 LINGO3P0C6S8 592 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 UBTFL6P0CB48 400 aaPredicted RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 ARAFP10398 606 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 COX4I1P13073 169 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 IL7RP16871 459 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 POU3F2P20265 443 aaPredicted RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 LHX2P50458 406 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 CCR4P51679 360 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 SUMO3P55854 103 aaPredicted RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 CLDN18P56856 261 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 CDK6Q00534 326 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 PLAURQ03405 335 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 SRYQ05066 204 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 PMPCAQ10713 525 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 SKP2Q13309 424 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 GNA13Q14344 377 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 TOMM34Q15785 309 aaPredicted RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 ADRM1Q16186 407 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 BCL2A1Q16548 175 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 TRMT5Q32P41 509 aaKnown RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 PLPPR5Q32ZL2 321 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 COQ5Q5HYK3 327 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 TMEM211Q6ICI0 200 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 NANOGP8Q6NSW7 305 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 MTFR2Q6P444 385 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 RPTNQ6XPR3 784 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 VRK2Q86Y07 508 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 PEX5LQ8IYB4 626 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 PCYOX1LQ8NBM8 494 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 FAM71CQ8NEG0 241 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 TOR1AIP2Q8NFQ8 470 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 OR5W2Q8NH69 310 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 NFKBIDQ8NI38 313 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 RP9Q8TA86 221 aaKnown RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 POC1BQ8TC44 478 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 PHF10Q8WUB8 498 aaKnown RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 WDR60Q8WVS4 1066 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 CNOT9Q92600 299 aaKnown RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 PMM1Q92871 262 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 ZBTB8AQ96BR9 441 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 ZNF524Q96C55 264 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 KCTD12Q96CX2 325 aaKnown RBP8.59□□□□□ -1.03
APTX-219ENST00000474658 RCN3Q96D15 328 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 RNF145Q96MT1 663 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 CCT8L2Q96SF2 557 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 TTYH2Q9BSA4 534 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 TMEM38AQ9H6F2 299 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 NANOGQ9H9S0 305 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 BCL2L10Q9HD36 194 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 SLC35A3Q9Y2D2 325 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 ARL2BPQ9Y2Y0 163 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 FAM215AQ9Y5M1 114 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 FLNCQ14315 2725 aa8.59□□□□□ -1.03
APTX-219ENST00000474658 DNAJC13O75165 2243 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 COL12A1Q99715 3063 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 C7orf72A4D263 438 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 H0Y3Z8 333 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 LINC01387J3KSC0 135 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 FXYD1O00168 92 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 DNAJA2O60884 412 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 PGM3O95394 542 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 EPPINO95925 133 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 NPPAP01160 153 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 OPN1LWP04000 364 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 HOXD4P09016 255 aaPredicted RBP8.58□□□□□ -1.04
APTX-219ENST00000474658 GLI4P10075 376 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 PEPDP12955 493 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 NID1P14543 1247 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 ZNF708P17019 499 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 ZNF17P17021 662 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 PSMA4P25789 261 aaKnown RBP8.58□□□□□ -1.04
APTX-219ENST00000474658 RYKP34925 604 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 PTGER4P35408 488 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 SUCLG1P53597 346 aaKnown RBP8.58□□□□□ -1.04
APTX-219ENST00000474658 CLDN15P56746 228 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 CLDN20P56880 219 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 NUP107P57740 925 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 FOXF1Q12946 379 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 CBFBQ13951 182 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 SCARB2Q14108 478 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 QPRTQ15274 297 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 ACSF3Q4G176 576 aaPredicted RBP8.58□□□□□ -1.04
APTX-219ENST00000474658 MRPL2Q5T653 305 aaKnown RBP8.58□□□□□ -1.04
APTX-219ENST00000474658 PRAMEF8Q5VWM4 474 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 PRAMEF7Q5VXH5 474 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 REEP3Q6NUK4 255 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 B3GNT6Q6ZMB0 384 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 MRGPRGQ86SM5 289 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 PTOV1Q86YD1 416 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 CMIPQ8IY22 773 aa8.58□□□□□ -1.04
APTX-219ENST00000474658 UBQLNLQ8IYU4 475 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms