RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 GTPBP1O00178 669 aaKnown RBP16.1■□□□□ 0.17
UPF3A-203ENST00000474056 TNFSF11O14788 317 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 STX11O75558 287 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 UGT2B17O75795 530 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 SMNDC1O75940 238 aaKnown RBP eCLIP16.1■□□□□ 0.171e-7■■■□□ 15.1
UPF3A-203ENST00000474056 SHC1P29353 583 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 CHI3L1P36222 383 aaPredicted RBP16.1■□□□□ 0.17
UPF3A-203ENST00000474056 CDKN2CP42773 168 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 SLC6A8P48029 635 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 ZNF141Q15928 474 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 BTLAQ7Z6A9 289 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 TMCO5AQ8N6Q1 288 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 FBXO27Q8NI29 283 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 GPR119Q8TDV5 335 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 FAM222BQ8WU58 562 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 NRGNQ92686 78 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 ZNF524Q96C55 264 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 ARSGQ96EG1 525 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 ATP6V1G3Q96LB4 118 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 OR52B2Q96RD2 323 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 OR52E6Q96RD3 313 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 INPP5KQ9BT40 448 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 EXD2Q9NVH0 621 aa16.1■□□□□ 0.17
UPF3A-203ENST00000474056 PRAMEF27A3QJZ7 478 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 SERINC4A6NH21 518 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 A6NNC1 897 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 MSTNO14793 375 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 ZNF264O43296 627 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 EFNA2O43921 213 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 CXCL13O43927 109 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 UBL4AP11441 157 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 ELK4P28324 431 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 SFTPDP35247 375 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 CPOXP36551 454 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 KHKP50053 298 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 CCR4P51679 360 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 EEF1A1P68104 462 aaKnown RBP16.09■□□□□ 0.17
UPF3A-203ENST00000474056 GUSBP1Q15486 140 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 PDCD4Q53EL6 469 aaKnown RBP16.09■□□□□ 0.17
UPF3A-203ENST00000474056 EEF1A1P5Q5VTE0 462 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 TYW3Q6IPR3 259 aaKnown RBP16.09■□□□□ 0.17
UPF3A-203ENST00000474056 FRRS1Q6ZNA5 592 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 OR2V1Q8NHB1 315 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 PANX1Q96RD7 426 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 ZBTB18Q99592 522 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 OPN3Q9H1Y3 402 aaPredicted RBP16.09■□□□□ 0.17
UPF3A-203ENST00000474056 RASSF1Q9NS23 344 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 DNAJB12Q9NXW2 375 aaKnown RBP16.09■□□□□ 0.17
UPF3A-203ENST00000474056 WDR45Q9Y484 360 aa16.09■□□□□ 0.17
UPF3A-203ENST00000474056 HRNRQ86YZ3 2850 aaPredicted RBP16.09■□□□□ 0.17
UPF3A-203ENST00000474056 CCDC154A6NI56 674 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 HMGN4O00479 90 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 ADAMDEC1O15204 470 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 KIAA0513O60268 411 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 EIF4E2O60573 245 aaKnown RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 AGR2O95994 175 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 GSNP06396 782 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 EPXP11678 715 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 FCGR2AP12318 317 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 IDO1P14902 403 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 PRKCAP17252 672 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 ME2P23368 584 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 EIF1P41567 113 aaKnown RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 MAPK14Q16539 360 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 ATAD3BQ5T9A4 648 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 ZNF474Q6S9Z5 364 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 ESPNLQ6ZVH7 1005 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 RNF130Q86XS8 419 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 LILRA2Q8N149 483 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 GLB1L3Q8NCI6 653 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 ROPN1LQ96C74 230 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 KLHL15Q96M94 604 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 POLDIP3Q9BY77 421 aaKnown RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 PRRG4Q9BZD6 226 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 CLEC4MQ9H2X3 399 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 PAQR5Q9NXK6 330 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 CLEC4AQ9UMR7 237 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 GPC6Q9Y625 555 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-203ENST00000474056 USH1CQ9Y6N9 552 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 F8P00451 2351 aa16.08■□□□□ 0.16
UPF3A-203ENST00000474056 PRR14LQ5THK1 2151 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 MED13LQ71F56 2210 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 UBDO15205 165 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 DIAPH2O60879 1101 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 SLC22A3O75751 556 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 CYP7B1O75881 506 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 CGAP01215 116 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 ADH6P28332 368 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 FAM27E3Q08E93 113 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 SKP2Q13309 424 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 CBFBQ13951 182 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 DAZAP2Q15038 168 aaPredicted RBP16.07■□□□□ 0.16
UPF3A-203ENST00000474056 GSTA3Q16772 222 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 PDSS1Q5T2R2 415 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 HBMQ6B0K9 141 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 ZNF621Q6ZSS3 439 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 HMGN2P46Q86SG4 172 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 TRIML2Q8N7C3 387 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 TOR1AIP2Q8NFQ8 470 aa16.07■□□□□ 0.16
UPF3A-203ENST00000474056 OR9I1Q8NGQ6 314 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms