RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GTPBP1O00178 669 aaKnown RBP17.06■□□□□ 0.32
PTCD3-210ENST00000473829 ZNF264O43296 627 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 TGM6O95932 706 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 IL2RAP01589 272 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 ANXA11P50995 505 aaKnown RBP17.06■□□□□ 0.32
PTCD3-210ENST00000473829 TXNL4AP83876 142 aaKnown RBP17.06■□□□□ 0.32
PTCD3-210ENST00000473829 SF3A3Q12874 501 aaKnown RBP eCLIP17.06■□□□□ 0.32
PTCD3-210ENST00000473829 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 HSPB2Q16082 182 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 TMCO5AQ8N6Q1 288 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 ACBD4Q8NC06 268 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 GPR119Q8TDV5 335 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 TRNT1Q96Q11 434 aaKnown RBP17.06■□□□□ 0.32
PTCD3-210ENST00000473829 KCNJ16Q9NPI9 418 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 LIPT1Q9Y234 373 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 AP4B1Q9Y6B7 739 aa17.06■□□□□ 0.32
PTCD3-210ENST00000473829 CLDN24A6NM45 220 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 ATP8B1O43520 1251 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 EFNA2O43921 213 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 EIF4E2O60573 245 aaKnown RBP17.05■□□□□ 0.32
PTCD3-210ENST00000473829 NUDT14O95848 222 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 CSTAP01040 98 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 OPN1LWP04000 364 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 UBTFL6P0CB48 400 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-210ENST00000473829 PRF1P14222 555 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 BMP5P22003 454 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 PGM1P36871 562 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 CRATP43155 626 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 AGFG1P52594 562 aaKnown RBP17.05■□□□□ 0.32
PTCD3-210ENST00000473829 IRX1P78414 480 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-210ENST00000473829 HPCAP84074 193 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 FOXF2Q12947 444 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 LRIF1Q5T3J3 769 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 MEIOBQ8N635 442 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 FAM71CQ8NEG0 241 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 WNT2BQ93097 391 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 MARVELD3Q96A59 401 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 ZNF845Q96IR2 970 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-210ENST00000473829 CCDC134Q9H6E4 229 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 TMEM185BQ9H7F4 350 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 TMEM45AQ9NWC5 275 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 PKDREJQ9NTG1 2253 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 FBN2P35556 2912 aa17.05■□□□□ 0.32
PTCD3-210ENST00000473829 TRBV5-3A0A0A0MS03 114 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 HNRNPRO43390 633 aaKnown RBP17.04■□□□□ 0.32
PTCD3-210ENST00000473829 DNAJA2O60884 412 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 CYP7B1O75881 506 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 VIMP08670 466 aaKnown RBP17.04■□□□□ 0.32
PTCD3-210ENST00000473829 NUDT7P0C024 238 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 NR2F1P10589 423 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 PRKCAP17252 672 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 IGFBP2P18065 325 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 RPS4Y1P22090 263 aaKnown RBP17.04■□□□□ 0.32
PTCD3-210ENST00000473829 SHC1P29353 583 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 MAGEA8P43361 318 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 CCR4P51679 360 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 DSTNP60981 165 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 CTU2Q2VPK5 515 aaKnown RBP17.04■□□□□ 0.32
PTCD3-210ENST00000473829 SLC25A35Q3KQZ1 300 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 LRRC74BQ6ZQY2 392 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 EIF3MQ7L2H7 374 aaKnown RBP17.04■□□□□ 0.32
PTCD3-210ENST00000473829 GRAMD2AQ8IUY3 354 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 GCNT2Q8N0V5 402 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 C10orf111Q8N326 155 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 METTL25Q8N6Q8 603 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 OR5W2Q8NH69 310 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 FBXO27Q8NI29 283 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 FIG4Q92562 907 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 ADGRG7Q96K78 797 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 PINK1Q9BXM7 581 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 LAT2Q9GZY6 243 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 ENKD1Q9H0I2 346 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 VAPAQ9P0L0 249 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 P2RX2Q9UBL9 471 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 TRIM33Q9UPN9 1127 aa17.04■□□□□ 0.32
PTCD3-210ENST00000473829 DSPPQ9NZW4 1301 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 DCHS2Q6V1P9 2916 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 A0A1W2PP18 115 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 AGAP5A6NIR3 686 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 CLIC1O00299 241 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 ADAM11O75078 769 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 RCBTB2O95199 551 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 NTN1O95631 604 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 BCHEP06276 602 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 TFPTP0C1Z6 253 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 TMIGD3P0DMS9 266 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-210ENST00000473829 TROVE2P10155 538 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTCD3-210ENST00000473829 COX6B1P14854 86 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 CTSSP25774 331 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 MDH1P40925 334 aaKnown RBP17.03■□□□□ 0.32
PTCD3-210ENST00000473829 QPRTQ15274 297 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 RGNQ15493 299 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 RPS26P11Q5JNZ5 115 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-210ENST00000473829 LSRQ86X29 649 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-210ENST00000473829 TOR1AIP2Q8NFQ8 470 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 SLC38A5Q8WUX1 472 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 OIT3Q8WWZ8 545 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 INTS12Q96CB8 462 aaKnown RBP17.03■□□□□ 0.32
PTCD3-210ENST00000473829 TM9SF2Q99805 663 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 TREX2Q9BQ50 279 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms