RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 RETREG3Q86VR2 466 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 TMEM200AQ86VY9 491 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 MISPQ8IVT2 679 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 DTNBP1Q96EV8 351 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 TRIB1Q96RU8 372 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 NMUR2Q9GZQ4 415 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.32■□□□□ 0.2
SNX4-204ENST00000473417 LIPT1Q9Y234 373 aa16.32■□□□□ 0.2
SNX4-204ENST00000473417 MAP1AP78559 2803 aaPredicted RBP16.32■□□□□ 0.2
SNX4-204ENST00000473417 CENPVL1A0A0U1RR11 272 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 H3BNH8 94 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 HCRTR2O43614 444 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 KIAA0513O60268 411 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 TNFRSF21O75509 655 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 UGT2B17O75795 530 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 CHRM4P08173 479 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 NR2F1P10589 423 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 CPN1P15169 458 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 HK1P19367 917 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 DRD4P21917 467 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 GCKP35557 465 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 MAGEA8P43361 318 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 DSTNP60981 165 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 RGNQ15493 299 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 ZNF141Q15928 474 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 NDUFAF6Q330K2 333 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 DLEU7Q6UYE1 221 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 CPLX4Q7Z7G2 160 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 IFNEQ86WN2 208 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 ZNF619Q8N2I2 560 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 ZPLD1Q8TCW7 415 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 TSPEARQ8WU66 669 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 ZG16BQ96DA0 208 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 C1GALT1C1Q96EU7 318 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 SFXN2Q96NB2 322 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 TRNT1Q96Q11 434 aaKnown RBP16.31■□□□□ 0.2
SNX4-204ENST00000473417 NSRP1Q9H0G5 558 aaKnown RBP16.31■□□□□ 0.2
SNX4-204ENST00000473417 QRSL1Q9H0R6 528 aaKnown RBP16.31■□□□□ 0.2
SNX4-204ENST00000473417 CALHM2Q9HA72 323 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 MRGBPQ9NV56 204 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 CARD8Q9Y2G2 431 aa16.31■□□□□ 0.2
SNX4-204ENST00000473417 MRPS18CQ9Y3D5 142 aaKnown RBP16.31■□□□□ 0.2
SNX4-204ENST00000473417 TRBV5-3A0A0A0MS03 114 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 SERINC4A6NH21 518 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 GTPBP1O00178 669 aaKnown RBP16.3■□□□□ 0.2
SNX4-204ENST00000473417 SYT5O00445 386 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 OIP5O43482 229 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 GUSBP08236 651 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 NUDT7P0C024 238 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 PEX19P40855 299 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 GFRA1P56159 465 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 RIPPLY3P57055 190 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 ZNF117Q03924 483 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 NFYCQ13952 458 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 MAPK14Q16539 360 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 SPNS3Q6ZMD2 512 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 LRRC74BQ6ZQY2 392 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 MTERF4Q7Z6M4 381 aaKnown RBP16.3■□□□□ 0.2
SNX4-204ENST00000473417 DHDDSQ86SQ9 333 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 OR5M1Q8NGP8 315 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 B4GALNT2Q8NHY0 566 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 RNASE6Q93091 150 aaKnown RBP16.3■□□□□ 0.2
SNX4-204ENST00000473417 KLHDC3Q9BQ90 382 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 SAP130Q9H0E3 1048 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 SLC38A1Q9H2H9 487 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 HHATLQ9HCP6 504 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 ARMCX1Q9P291 453 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 P2RX2Q9UBL9 471 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 CAPN7Q9Y6W3 813 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 ITPR3Q14573 2671 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 MPDZO75970 2070 aa16.3■□□□□ 0.2
SNX4-204ENST00000473417 LOC100653049A0A140TA62 436 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 FBP2O00757 339 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 KRT34O76011 436 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 BCHEP06276 602 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 UQCRC1P31930 480 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 STARP49675 285 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 FADDQ13158 208 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 SNTB1Q13884 538 aaKnown RBP16.29■□□□□ 0.2
SNX4-204ENST00000473417 GANABQ14697 944 aaKnown RBP16.29■□□□□ 0.2
SNX4-204ENST00000473417 MAPK11Q15759 364 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 RAET1LQ5VY80 246 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 CBLN3Q6UW01 205 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 ENPP6Q6UWR7 440 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 ADGRE4PQ86SQ3 457 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 ZZZ3Q8IYH5 903 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 DPP10Q8N608 796 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 C9orf106Q8NAJ2 232 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 LRRC46Q96FV0 321 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 TUBA1CQ9BQE3 449 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 IKZF5Q9H5V7 419 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 FOXD3Q9UJU5 478 aaPredicted RBP16.29■□□□□ 0.2
SNX4-204ENST00000473417 VDAC3Q9Y277 283 aa16.29■□□□□ 0.2
SNX4-204ENST00000473417 SETD2Q9BYW2 2564 aaPredicted RBP16.28■□□□□ 0.2
SNX4-204ENST00000473417 SHISA8B8ZZ34 492 aa16.28■□□□□ 0.2
SNX4-204ENST00000473417 SNX3O60493 162 aa16.28■□□□□ 0.2
SNX4-204ENST00000473417 CCDC22O60826 627 aa16.28■□□□□ 0.2
SNX4-204ENST00000473417 CTAG2O75638 210 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms