RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SPATA5L1Q9BVQ7 753 aa18.83■□□□□ 0.6
TOP3A-204ENST00000472959 TP63Q9H3D4 680 aaPredicted RBP18.83■□□□□ 0.6
TOP3A-204ENST00000472959 ARMC7Q9H6L4 198 aa18.83■□□□□ 0.6
TOP3A-204ENST00000472959 TNFRSF10DQ9UBN6 386 aa18.83■□□□□ 0.6
TOP3A-204ENST00000472959 TINAGQ9UJW2 476 aa18.83■□□□□ 0.6
TOP3A-204ENST00000472959 ANGPT4Q9Y264 503 aa18.83■□□□□ 0.6
TOP3A-204ENST00000472959 ZGRF1Q86YA3 2104 aa18.83■□□□□ 0.6
TOP3A-204ENST00000472959 HELZ2Q9BYK8 2649 aaKnown RBP18.83■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF407Q9C0G0 2248 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 FIGNL2A6NMB9 653 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 LRRTM2O43300 516 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 CYP7B1O75881 506 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 HOXD4P09016 255 aaPredicted RBP18.82■□□□□ 0.6
TOP3A-204ENST00000472959 LINGO3P0C6S8 592 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 NUDT2P50583 147 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 GZMMP51124 257 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 SF3B4Q15427 424 aaKnown RBP eCLIP18.82■□□□□ 0.6
TOP3A-204ENST00000472959 BCL2A1Q16548 175 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 PLPPR5Q32ZL2 321 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 EMC4Q5J8M3 183 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 RNF220Q5VTB9 566 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 CALHM3Q86XJ0 350 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 GTPBP8Q8N3Z3 284 aaPredicted RBP18.82■□□□□ 0.6
TOP3A-204ENST00000472959 OR5M9Q8NGP3 310 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 BCAS4Q8TDM0 211 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 GPR119Q8TDV5 335 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF607Q96SK3 696 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 PRDM14Q9GZV8 571 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 PNPLA3Q9NST1 481 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 PRDM4Q9UKN5 801 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 VDAC3Q9Y277 283 aa18.82■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF443Q9Y2A4 671 aaPredicted RBP18.82■□□□□ 0.6
TOP3A-204ENST00000472959 OR2M5A3KFT3 312 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 CLDN24A6NM45 220 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 E9PLN8 166 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 WDR1O75083 606 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 SERPINB7O75635 380 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 GABRA1P14867 456 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 CPN1P15169 458 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 PGCP20142 388 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 TCEA1P23193 301 aaKnown RBP18.81■□□□□ 0.6
TOP3A-204ENST00000472959 ADH6P28332 368 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 PCGF2P35227 344 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 PTGER4P35408 488 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 SLC6A8P48029 635 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 CCR4P51679 360 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 KRT72Q14CN4 511 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF311Q5JNZ3 666 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 MRPL2Q5T653 305 aaKnown RBP18.81■□□□□ 0.6
TOP3A-204ENST00000472959 MTFR2Q6P444 385 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 VRK2Q86Y07 508 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 ZZZ3Q8IYH5 903 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF440Q8IYI8 595 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 FAM26EQ8N5C1 309 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 CNOT9Q92600 299 aaKnown RBP18.81■□□□□ 0.6
TOP3A-204ENST00000472959 REXO5Q96IC2 774 aaKnown RBP18.81■□□□□ 0.6
TOP3A-204ENST00000472959 VKORC1Q9BQB6 163 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 STOML1Q9UBI4 398 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 TAGLN3Q9UI15 199 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 SH3BGRL2Q9UJC5 107 aa18.81■□□□□ 0.6
TOP3A-204ENST00000472959 GPC6Q9Y625 555 aaPredicted RBP18.81■□□□□ 0.6
TOP3A-204ENST00000472959 UBR5O95071 2799 aaPredicted RBP18.8■□□□□ 0.6
TOP3A-204ENST00000472959 CLEC18AA5D8T8 446 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 CDHR4A6H8M9 788 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 PRORSD1PA6NEY8 169 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 AHRRA9YTQ3 701 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 CCL21O00585 134 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 PABPC4LP0CB38 370 aaKnown RBP18.8■□□□□ 0.6
TOP3A-204ENST00000472959 ESRRAP11474 423 aaPredicted RBP18.8■□□□□ 0.6
TOP3A-204ENST00000472959 PEPDP12955 493 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 ACVR2AP27037 513 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 PER3P56645 1201 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 EEF1A1P68104 462 aaKnown RBP18.8■□□□□ 0.6
TOP3A-204ENST00000472959 VMACQ2NL98 169 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 INTS11Q5TA45 600 aaKnown RBP18.8■□□□□ 0.6
TOP3A-204ENST00000472959 C8orf82Q6P1X6 216 aaPredicted RBP18.8■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF585AQ6P3V2 769 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 ERICH5Q6P6B1 374 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 CLEC18BQ6UXF7 455 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF836Q6ZNA1 936 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 FJX1Q86VR8 437 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 GRAMD2AQ8IUY3 354 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 FITM2Q8N6M3 262 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 CLEC18CQ8NCF0 446 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 TMEM234Q8WY98 164 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 ST8SIA1Q92185 356 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 WDYHV1Q96HA8 205 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 MRGPRX4Q96LA9 322 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 DNAJB12Q9NXW2 375 aaKnown RBP18.8■□□□□ 0.6
TOP3A-204ENST00000472959 MEMO1Q9Y316 297 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 AP4B1Q9Y6B7 739 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 DNAJC13O75165 2243 aa18.8■□□□□ 0.6
TOP3A-204ENST00000472959 NCKAP5O14513 1909 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ETV2O00321 342 aaPredicted RBP18.79■□□□□ 0.6
TOP3A-204ENST00000472959 BCAS1O75363 584 aaPredicted RBP18.79■□□□□ 0.6
TOP3A-204ENST00000472959 UQCRBP14927 111 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF708P17019 499 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 POU3F2P20265 443 aaPredicted RBP18.79■□□□□ 0.6
TOP3A-204ENST00000472959 PRKAR1BP31321 381 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 LHX2P50458 406 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms