RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	RRAD	P55042	308 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	VSX2	P58304	361 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TLE4	Q04727	773 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	WDR72	Q3MJ13	1102 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ZNF658B	Q4V348	819 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	AGK	Q53H12	422 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ARMCX4	Q5H9R4	360 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	OR2B11	Q5JQS5	317 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	SLC35D3	Q5M8T2	416 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TIMM23B	Q5SRD1	257 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	SYT6	Q5T7P8	510 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	FAM46C	Q5VWP2	391 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	FBXW9	Q5XUX1	488 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TRIQK	Q629K1	86 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	EEF1DP3	Q658K8	133 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TCTN3	Q6NUS6	607 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PNCK	Q6P2M8	343 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	GJB7	Q6PEY0	223 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	DPY19L2P2	Q6ZN68	376 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	DET1	Q7L5Y6	550 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NUFIP2	Q7Z417	695 aa	Known RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	CPEB2	Q7Z5Q1	589 aa	Known RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	RANBP3L	Q86VV4	465 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	GPSM1	Q86YR5	675 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	CBWD2	Q8IUF1	395 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	MFSD6L	Q8IWD5	586 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	C4orf33	Q8N1A6	199 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	STX19	Q8N4C7	294 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ARRDC1	Q8N5I2	433 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TMEM217	Q8N7C4	229 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	CLDN22	Q8N7P3	220 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	BOLL	Q8N9W6	283 aa	Known RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ST6GALNAC3	Q8NDV1	305 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	FAM46D	Q8NEK8	389 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PXT1	Q8NFP0	134 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	OR52I2	Q8NH67	350 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PIGX	Q8TBF5	258 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	WDR20	Q8TBZ3	569 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NR4A3	Q92570	626 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	YIPF6	Q96EC8	236 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	L3HYPDH	Q96EM0	354 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PELI1	Q96FA3	418 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	MS4A14	Q96JA4	679 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398		Q96M66	194 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ZNF512	Q96ME7	567 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	QKI	Q96PU8	341 aa	Known RBP eCLIP	2.96	□□□□□ -1.94	6e-6	■■■■□ 23.1
TTC3-214	ENST00000472398	SLC38A3	Q99624	504 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	IL12RB2	Q99665	862 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NDUFAF3	Q9BU61	184 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TRAF4	Q9BUZ4	470 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TMED9	Q9BVK6	235 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	VCX	Q9H320	206 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PIGM	Q9H3S5	423 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	DCLRE1B	Q9H816	532 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	FKRP	Q9H9S5	495 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	WFDC1	Q9HC57	220 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	DNAJC4	Q9NNZ3	241 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ZFP64	Q9NPA5	681 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TMEM138	Q9NPI0	162 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NIT2	Q9NQR4	276 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	POLE4	Q9NR33	117 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	INPP5E	Q9NRR6	644 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PHPT1	Q9NRX4	125 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ADARB2	Q9NS39	739 aa	Known RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NLE1	Q9NVX2	485 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	IMPAD1	Q9NX62	359 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TREM2	Q9NZC2	230 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TFCP2L1	Q9NZI6	479 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NLK	Q9UBE8	527 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NKX1-2	Q9UD57	310 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ZNF346	Q9UL40	294 aa	Known RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ZNF490	Q9ULM2	529 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	REXO2	Q9Y3B8	237 aa	Known RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ZNF337	Q9Y3M9	751 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TIMM13	Q9Y5L4	95 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ZNF644	Q9H582	1327 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TBC1D3E	A0A087X179	549 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NPIPA5	A0A0B4J1W7	369 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398		A0A1W2PPV9	198 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398		A0A1W2PRG6	482 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	ILVBL	A1L0T0	632 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	MBD3L5	A6NJ08	208 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	AQP7P3	A6NL99	342 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NPIPA5	E9PKD4	350 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398		E9PLN8	166 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	NPIPA3	F8WFD2	350 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398		G3V3Y1	287 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	EEF2K	O00418	725 aa	Known RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	YY2	O15391	372 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	CHP2	O43745	196 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	XPNPEP2	O43895	674 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PRKY	O43930	277 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PPP1R11	O60927	126 aa	Predicted RBP	2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	FCN3	O75636	299 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	OR2J2	O76002	312 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	EPHA3	P29320	983 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	GJC1	P36383	396 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	MTHFS	P49914	203 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	PDLIM4	P50479	330 aa		2.96	□□□□□ -1.94
TTC3-214	ENST00000472398	TAS2R50	P59544	299 aa		2.96	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms