RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ARFGAP2Q8N6H7 521 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 TMCO5AQ8N6Q1 288 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 METTL25Q8N6Q8 603 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 TOR1AIP2Q8NFQ8 470 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 OR5W2Q8NH69 310 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 FBXO27Q8NI29 283 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 OIT3Q8WWZ8 545 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 STON2Q8WXE9 905 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 FIG4Q92562 907 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 SPDL1Q96EA4 605 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 ARSGQ96EG1 525 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 ZNF845Q96IR2 970 aaPredicted RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 ZFP3Q96NJ6 502 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 TRNT1Q96Q11 434 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 THUMPD3Q9BV44 507 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 PINK1Q9BXM7 581 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 TRIM8Q9BZR9 551 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 LAT2Q9GZY6 243 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 PAIP1Q9H074 479 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 QRSL1Q9H0R6 528 aaKnown RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 SLC38A1Q9H2H9 487 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 MTHFD2LQ9H903 347 aaPredicted RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 TPT1P8Q9HAU6 139 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 NPHS2Q9NP85 383 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 SLC52A3Q9NQ40 469 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 L3MBTL1Q9Y468 752 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 PCDHB14Q9Y5E9 798 aa8.24□□□□□ -1.09
SYN3-211ENST00000472027 GPC6Q9Y625 555 aaPredicted RBP8.24□□□□□ -1.09
SYN3-211ENST00000472027 UQCRHLA0A096LP55 91 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 CLIC1O00299 241 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 NR5A2O00482 541 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 ADAMDEC1O15204 470 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 UBTFL6P0CB48 400 aaPredicted RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 NR2F1P10589 423 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 CD1EP15812 388 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 PRKCAP17252 672 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 IL11P20809 199 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 UQCRC1P31930 480 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 PGM1P36871 562 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 EIF1AXP47813 144 aaKnown RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 ASCL1P50553 236 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 EEF1A1P68104 462 aaKnown RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 HPCAP84074 193 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 SKP2Q13309 424 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 SQLEQ14534 574 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 PON3Q15166 354 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 QPRTQ15274 297 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 MAPK11Q15759 364 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 CTU2Q2VPK5 515 aaKnown RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 HSP90B2PQ58FF3 399 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 PAGE3Q5JUK9 113 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 EEF1A1P5Q5VTE0 462 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 GDF7Q7Z4P5 450 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 HMGN2P46Q86SG4 172 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 LILRA2Q8N149 483 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 FNDC9Q8TBE3 224 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 RNASE6Q93091 150 aaKnown RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 LRRC46Q96FV0 321 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 AURKBQ96GD4 344 aaPredicted RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 ADGRG7Q96K78 797 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 SIKE1Q9BRV8 207 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 SFXN3Q9BWM7 321 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 TMEM185BQ9H7F4 350 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 TMEM45AQ9NWC5 275 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 PAQR5Q9NXK6 330 aaPredicted RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 JKAMPQ9P055 326 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 SLAMF8Q9P0V8 285 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 SLC35A3Q9Y2D2 325 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 ZNF175Q9Y473 711 aa8.23□□□□□ -1.09
SYN3-211ENST00000472027 NUP214P35658 2090 aaPredicted RBP8.23□□□□□ -1.09
SYN3-211ENST00000472027 KIAA1549Q9HCM3 1950 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 PCNX3Q9H6A9 2034 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 A0A096LPI6 279 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 A0A0G2JND7 137 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 A0A0J9YW62 118 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 A0A1W2PNV4 684 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 A0A1W2PP18 115 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 AGAP5A6NIR3 686 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 CLDN24A6NM45 220 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 EEF1E1-BLOC1S5C9J1V9 151 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 TNFSF11O14788 317 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 EEF1E1O43324 174 aaKnown RBP8.22□□□□□ -1.09
SYN3-211ENST00000472027 CXCL13O43927 109 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 DNAJA2O60884 412 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 BCAS1O75363 584 aaPredicted RBP8.22□□□□□ -1.09
SYN3-211ENST00000472027 TNFSF13O75888 250 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 NTN1O95631 604 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 CRHP06850 196 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 TFPTP0C1Z6 253 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 HOXB9P17482 250 aaPredicted RBP8.22□□□□□ -1.09
SYN3-211ENST00000472027 PGCP20142 388 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 CAPN3P20807 821 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 ME2P23368 584 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 SHC1P29353 583 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 SFTPDP35247 375 aa8.22□□□□□ -1.09
SYN3-211ENST00000472027 CCR4P51679 360 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms