RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 TBC1D10AQ9BXI6 508 aa1.9□□□□□ -2.11
RBM39-228ENST00000471635 NFKBIZQ9BYH8 718 aa1.9□□□□□ -2.11
RBM39-228ENST00000471635 HOMER3Q9NSC5 361 aa1.9□□□□□ -2.11
RBM39-228ENST00000471635 C6orf203Q9P0P8 240 aaPredicted RBP1.9□□□□□ -2.11
RBM39-228ENST00000471635 BCAP29Q9UHQ4 241 aa1.9□□□□□ -2.11
RBM39-228ENST00000471635 NOL7Q9UMY1 257 aaKnown RBP1.9□□□□□ -2.11
RBM39-228ENST00000471635 TEX264Q9Y6I9 313 aa1.9□□□□□ -2.11
RBM39-228ENST00000471635 C11orf94C9JXX5 98 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ADAM12O43184 909 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 VEGFDO43915 354 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 FAM189A1O60320 539 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 OR10H3O60404 316 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 HSF2BPO75031 334 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ZNF780AO75290 641 aaPredicted RBP1.89□□□□□ -2.11
RBM39-228ENST00000471635 TSPAN8P19075 237 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 SH3BGRP55822 239 aaPredicted RBP1.89□□□□□ -2.11
RBM39-228ENST00000471635 ACTN3Q08043 901 aaPredicted RBP1.89□□□□□ -2.11
RBM39-228ENST00000471635 RPA4Q13156 261 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 TFDP1Q14186 410 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ZNF836Q6ZNA1 936 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ARMCX2Q7L311 632 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ARCQ7LC44 396 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ZNF615Q8N8J6 731 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ZSCAN4Q8NAM6 433 aaPredicted RBP1.89□□□□□ -2.11
RBM39-228ENST00000471635 IL1F10Q8WWZ1 152 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 STARD8Q92502 1023 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 RAB7BQ96AH8 199 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 CABS1Q96KC9 395 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ZNF560Q96MR9 790 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ZNF578Q96N58 590 aaPredicted RBP1.89□□□□□ -2.11
RBM39-228ENST00000471635 SPATA13Q96N96 652 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 SRXN1Q9BYN0 137 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 SIRPDQ9H106 197 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 TPK1Q9H3S4 243 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 MID1IP1Q9NPA3 183 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 ZDHHC4Q9NPG8 344 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 COMMD8Q9NX08 183 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 CYP39A1Q9NYL5 469 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 NUFIP1Q9UHK0 495 aaKnown RBP1.89□□□□□ -2.11
RBM39-228ENST00000471635 PLA2G4CQ9UP65 541 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 PLLPQ9Y342 182 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 UGT2A1Q9Y4X1 527 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 NEUROG3Q9Y4Z2 214 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 MAP3K15Q6ZN16 1313 aa1.89□□□□□ -2.11
RBM39-228ENST00000471635 A0A0U1RQS6 177 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 ZBTB14O43829 449 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 KIAA0754O94854 1291 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 PLEKP08567 350 aaPredicted RBP1.88□□□□□ -2.11
RBM39-228ENST00000471635 BCKDHAP12694 445 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 MYBPC1Q00872 1141 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 CYS1Q717R9 158 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 PSMA8Q8TAA3 256 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 ATP6V0A1Q93050 837 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 SLC25A36Q96CQ1 311 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 CEP170P1Q96L14 293 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 PPDPFQ9H3Y8 114 aa1.88□□□□□ -2.11
RBM39-228ENST00000471635 PRMT8Q9NR22 394 aaPredicted RBP1.88□□□□□ -2.11
RBM39-228ENST00000471635 UTP6Q9NYH9 597 aaKnown RBP1.88□□□□□ -2.11
RBM39-228ENST00000471635 XPO7Q9UIA9 1087 aaKnown RBP1.88□□□□□ -2.11
RBM39-228ENST00000471635 ZNF490Q9ULM2 529 aaPredicted RBP1.88□□□□□ -2.11
RBM39-228ENST00000471635 EIF3LQ9Y262 564 aaKnown RBP1.88□□□□□ -2.11
RBM39-228ENST00000471635 PHF3Q92576 2039 aaKnown RBP1.88□□□□□ -2.11
RBM39-228ENST00000471635 H3BTX0 84 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 GFYI3L273 518 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 OLFM2O95897 454 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 RETP07949 1114 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 ABHD2P08910 425 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 GCFC2P16383 781 aaKnown RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 XRCC1P18887 633 aaPredicted RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 OTX2P32243 289 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 TFPI2P48307 235 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 SRP54P61011 504 aaKnown RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 GFPT1Q06210 699 aaPredicted RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 SLC10A7Q0GE19 358 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 DEFB116Q30KQ4 102 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 IL23RQ5VWK5 629 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 Q5W150 140 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 SCYL2Q6P3W7 929 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 C1orf186Q6ZWK4 172 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 TTC5Q8N0Z6 440 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 ZNF709Q8N972 641 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 TMEM185AQ8NFB2 350 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 MS4A14Q96JA4 679 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 MCHR1Q99705 422 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 ZNF670Q9BS34 389 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 HDHD3Q9BSH5 251 aaPredicted RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 COMMD4Q9H0A8 199 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 DDX47Q9H0S4 455 aaKnown RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 POLR3FQ9H1D9 316 aaPredicted RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 SLC25A22Q9H936 323 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 GPN2Q9H9Y4 310 aaPredicted RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 EML4Q9HC35 981 aaKnown RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 AIG1Q9NVV5 245 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 HMG20BQ9P0W2 317 aa1.87□□□□□ -2.11
RBM39-228ENST00000471635 TDRKHQ9Y2W6 561 aaKnown RBP1.87□□□□□ -2.11
RBM39-228ENST00000471635 SPAG7O75391 227 aa1.86□□□□□ -2.11
RBM39-228ENST00000471635 PNPP00491 289 aa1.86□□□□□ -2.11
RBM39-228ENST00000471635 MOSP00540 346 aa1.86□□□□□ -2.11
RBM39-228ENST00000471635 MRPL3P09001 348 aaKnown RBP1.86□□□□□ -2.11
RBM39-228ENST00000471635 GSTT2P0CG29 244 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms