RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 FAM129AQ9BZQ8 928 aa4.32□□□□□ -1.72
CCDC39-202ENST00000471307 SLC39A8Q9C0K1 460 aa4.32□□□□□ -1.72
CCDC39-202ENST00000471307 C1orf21Q9H246 121 aa4.32□□□□□ -1.72
CCDC39-202ENST00000471307 POMKQ9H5K3 350 aa4.32□□□□□ -1.72
CCDC39-202ENST00000471307 UBE2ZQ9H832 354 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-202ENST00000471307 DUS2Q9NX74 493 aaKnown RBP4.32□□□□□ -1.72
CCDC39-202ENST00000471307 AKAP7Q9P0M2 348 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-202ENST00000471307 HPCAL4Q9UM19 191 aa4.32□□□□□ -1.72
CCDC39-202ENST00000471307 MFHAS1Q9Y4C4 1052 aa4.32□□□□□ -1.72
CCDC39-202ENST00000471307 MYO10Q9HD67 2058 aa4.32□□□□□ -1.72
CCDC39-202ENST00000471307 SHROOM3Q8TF72 1996 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 CDH23Q9H251 3354 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 KRT87PA6NCN2 255 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 OOEPA6NGQ2 149 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ANHXE9PGG2 379 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 DFFAO00273 331 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SLC33A1O00400 549 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-202ENST00000471307 CHADO15335 359 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 TTI1O43156 1089 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 PSMD3O43242 534 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 MBTPS2O43462 519 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 KDELR3O43731 214 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 GPRIN2O60269 458 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SEC22BO75396 215 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SIX3O95343 332 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-202ENST00000471307 GSRP00390 522 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 IFNB1P01574 187 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 RHOCP08134 193 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 RHOXF2BP0C7M4 288 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 CCNB1P14635 433 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 AOC1P19801 751 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 IL10P22301 178 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 FCARP24071 287 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 IVDP26440 423 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 RPL22P35268 128 aaKnown RBP4.31□□□□□ -1.72
CCDC39-202ENST00000471307 HSD17B3P37058 310 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SGSHP51688 502 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 CAV1Q03135 178 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 CACNG1Q06432 222 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SULT2A1Q06520 285 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 CUL1Q13616 776 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 RFTN1Q14699 578 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ZNF146Q15072 292 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 PARP6Q2NL67 630 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 FUT11Q495W5 492 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 TEX44Q53QW1 395 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 TOR1AIP1Q5JTV8 583 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ATP1A1-AS1Q5TC04 95 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ETFRF1Q6IPR1 90 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 VITQ6UXI7 678 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 TPGS1Q6ZTW0 290 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 Q7L0L9 218 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 PID1Q7Z2X4 250 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SPATA19Q7Z5L4 167 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ZNF584Q8IVC4 421 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 PEX5LQ8IYB4 626 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 BBS5Q8N3I7 341 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ATPAF2Q8N5M1 289 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 NPWQ8N729 165 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 GBP7Q8N8V2 638 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-202ENST00000471307 PGM2Q96G03 612 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 CELF6Q96J87 481 aaKnown RBP4.31□□□□□ -1.72
CCDC39-202ENST00000471307 RMDN2Q96LZ7 410 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SPATA13Q96N96 652 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 GUCD1Q96NT3 240 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 PPP1R2P1Q96PQ5 205 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ATP6V0BQ99437 205 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 IL12RB2Q99665 862 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 RHOXF2Q9BQY4 288 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 FEM1AQ9BSK4 669 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 BBS2Q9BXC9 721 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 PARD6BQ9BYG5 372 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 SLC5A7Q9GZV3 580 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 TSPYL1Q9H0U9 437 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 ABCG4Q9H172 646 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 GDF3Q9NR23 364 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 FAM114A2Q9NRY5 505 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 NLGN3Q9NZ94 848 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 VPS18Q9P253 973 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 OR51B4Q9Y5P0 310 aa4.31□□□□□ -1.72
CCDC39-202ENST00000471307 C5orf42Q9H799 3197 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 DENND4AQ7Z401 1863 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 A0A0D9SEW6 157 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 RNF103-CHMP3A0A140T963 221 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 A0A1W2PRV1 198 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 A4D1N5 150 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SHISA9B4DS77 424 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 NEDD8-MDP1E9PL57 170 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 KCNK1O00180 336 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 RNF103O00237 685 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 TXNL1O43396 289 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 CACNG3O60359 315 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 GALR3O60755 368 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 MTRF1O75570 445 aaKnown RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ZMPSTE24O75844 475 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ANXA9O76027 345 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms