RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 C16orf47Q6ZP98 133 aaPredicted RBP16.66■□□□□ 0.26
SMC4-211ENST00000469858 LSMEM1Q8N8F7 131 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 OIT3Q8WWZ8 545 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 TMIGD2Q96BF3 282 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 PLA2G12AQ9BZM1 189 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 CCDC90BQ9GZT6 254 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 RPS6KB2Q9UBS0 482 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 PISDQ9UG56 409 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 PPIEQ9UNP9 301 aaKnown RBP16.66■□□□□ 0.26
SMC4-211ENST00000469858 PTRH2Q9Y3E5 179 aaKnown RBP16.66■□□□□ 0.26
SMC4-211ENST00000469858 EXPH5Q8NEV8 1989 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 SMIM31A0A1B0GVY4 71 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 STK17BO94768 372 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 CYC1P08574 325 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 GABRB1P18505 474 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 ADH7P40394 386 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 CCR4P51679 360 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 NEDD8Q15843 81 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 KIRREL2Q6UWL6 708 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 CASP12Q6UXS9 341 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 RASSF6Q6ZTQ3 369 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 PTCHD4Q6ZW05 846 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 TMCO5AQ8N6Q1 288 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 ZNF540Q8NDQ6 660 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 FAM71CQ8NEG0 241 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 TEX47Q8TBZ9 253 aa16.65■□□□□ 0.26
SMC4-211ENST00000469858 GTPBP1O00178 669 aaKnown RBP16.64■□□□□ 0.25
SMC4-211ENST00000469858 OIP5O43482 229 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 CSO75390 466 aaKnown RBP16.64■□□□□ 0.25
SMC4-211ENST00000469858 JMJD7P0C870 316 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 LCN1P31025 176 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 NRG3P56975 720 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 SLC26A5P58743 744 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 C12orf73Q69YU5 71 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 ZNF517Q6ZMY9 492 aaPredicted RBP16.64■□□□□ 0.25
SMC4-211ENST00000469858 ZNF440Q8IYI8 595 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 RNF113BQ8IZP6 322 aaKnown RBP16.64■□□□□ 0.25
SMC4-211ENST00000469858 SPARTQ8N0X7 666 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 POGLUT1Q8NBL1 392 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 TP53INP1Q96A56 240 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 NODALQ96S42 347 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 PARD6AQ9NPB6 346 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 C20orf141Q9NUB4 165 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 NCDNQ9UBB6 729 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 CARD8Q9Y2G2 431 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 SNX5Q9Y5X3 404 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.64■□□□□ 0.25
SMC4-211ENST00000469858 CDC42EP2O14613 210 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 ZNF264O43296 627 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 KLF4O43474 513 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 UMODP07911 640 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 IFI30P13284 250 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 NUDT6P53370 316 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 PNLIPRP2P54317 469 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 COPZ1P61923 177 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 SLC35A2P78381 396 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 SKP2Q13309 424 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 GINS1Q14691 196 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 CSRP2Q16527 193 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 CBLN3Q6UW01 205 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 IL4I1Q96RQ9 567 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 DPH1Q9BZG8 443 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 DUSP21Q9H596 190 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 ZBTB20Q9HC78 741 aaPredicted RBP16.64■□□□□ 0.25
SMC4-211ENST00000469858 AMBNQ9NP70 447 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 ATP13A2Q9NQ11 1180 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 SELENONQ9NZV5 590 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 ERVK-18Q9QC07 812 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 MED31Q9Y3C7 131 aa16.64■□□□□ 0.25
SMC4-211ENST00000469858 CCDC160A6NGH7 325 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 TMX2-CTNND1H3BSU7 103 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 MPZL2O60487 215 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 KLF7O75840 302 aaPredicted RBP16.63■□□□□ 0.25
SMC4-211ENST00000469858 STAT5AP42229 794 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 GIPRP48546 466 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 CDCP2Q5VXM1 449 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 ULK3Q6PHR2 472 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 DHRS13Q6UX07 377 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 AHSA2Q719I0 299 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 OR8D4Q8NGM9 314 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 NUBPLQ8TB37 319 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 LIN37Q96GY3 246 aaPredicted RBP16.63■□□□□ 0.25
SMC4-211ENST00000469858 TBL1XR1Q9BZK7 514 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 RTN4RQ9BZR6 473 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 VCX3AQ9NNX9 186 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 TOR4AQ9NXH8 423 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 TVP23BQ9NYZ1 205 aa16.63■□□□□ 0.25
SMC4-211ENST00000469858 WWP2O00308 870 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 GNB5O14775 395 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 CSNK2BP67870 215 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 CDK5Q00535 292 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 PRKCDQ05655 676 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 TCF15Q12870 199 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 PMS2P3Q13401 168 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 CLEC12AQ5QGZ9 265 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 ACSM5Q6NUN0 579 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 MARCH3Q86UD3 253 aa16.62■□□□□ 0.25
SMC4-211ENST00000469858 SH3YL1Q96HL8 342 aaPredicted RBP16.62■□□□□ 0.25
SMC4-211ENST00000469858 MPP4Q96JB8 637 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms