RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CCM2LQ9NUG4 571 aaPredicted RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 DOCK1Q14185 1865 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 SDHDO14521 159 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 IFNA17P01571 189 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 CHRM4P08173 479 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 ACPPP15309 386 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 ATP1B3P54709 279 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 MAP4K2Q12851 820 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 SFT2D3Q587I9 215 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 OPN5Q6U736 354 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 TP53INP2Q8IXH6 220 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 METTL25Q8N6Q8 603 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 FAM83FQ8NEG4 500 aaPredicted RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 ZNF420Q8TAQ5 688 aaPredicted RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 SLC12A9Q9BXP2 914 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 ACOT13Q9NPJ3 140 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 ARMC1Q9NVT9 282 aa8.19□□□□□ -1.1
HPS4-209ENST00000466781 MARCH4Q9P2E8 410 aaPredicted RBP8.19□□□□□ -1.1
HPS4-209ENST00000466781 BCAT2O15382 392 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 RAD1O60671 282 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 FUT1P19526 365 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 HOXA1P49639 335 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 PIGFQ07326 219 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 ARL16Q0P5N6 197 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SCAPQ12770 1279 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 C1orf220Q5T0J3 134 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SFRP4Q6FHJ7 346 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 MKXQ8IYA7 352 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 OR5D14Q8NGL3 314 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 PIGCQ92535 297 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 UPRTQ96BW1 309 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 ISOC1Q96CN7 298 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 UHRF1Q96T88 793 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 BOCQ9BWV1 1114 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 UBE2ZQ9H832 354 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 DMRT3Q9NQL9 472 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 POLE4Q9NR33 117 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 A0A1W2PPH5 198 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 RNF212BA8MTL3 300 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SC5DO75845 299 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 TOXO94900 526 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CLIC3O95833 236 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 IGHG1P01857 330 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SLC35E2BP0CK96 405 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 HMGCLP35914 325 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 THBS3P49746 956 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 RGS6P49758 472 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SLC7A9P82251 487 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CYCSP99999 105 aaKnown RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 AGAP7PQ5VUJ5 663 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 AGAP6Q5VW22 663 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 TMPRSS7Q7RTY8 843 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 ZNF551Q7Z340 670 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 SDR9C7Q8NEX9 313 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 IL17RDQ8NFM7 739 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 OR1J4Q8NGS1 313 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 OR5W2Q8NH69 310 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 LMO3Q8TAP4 145 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 FER1L6-AS2Q96M78 137 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 AGAP4Q96P64 663 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 FKRPQ9H9S5 495 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 ARNT2Q9HBZ2 717 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 RPH3ALQ9UNE2 315 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 DNAJB5O75953 348 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 OSMP13725 252 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 GABARAPL2P60520 117 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SEC61A1P61619 476 aaKnown RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 ZNF791Q3KP31 576 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 TP53I3Q53FA7 332 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 GARNL3Q5VVW2 1013 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 KCTD20Q7Z5Y7 419 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 TECPR1Q7Z6L1 1165 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CPXM2Q8N436 756 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 IQCF1Q8N6M8 205 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SPPL3Q8TCT6 385 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 FRZBQ92765 325 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CDS1Q92903 461 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 INTS14Q96SY0 518 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 MGLLQ99685 303 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 ALG8Q9BVK2 526 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CCDC106Q9BWC9 280 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 POT1Q9NUX5 634 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 IER3IP1Q9Y5U9 82 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SIPA1L3O60292 1781 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 NOTOA8MTQ0 251 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 TOR1AO14656 332 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 UGDHO60701 494 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 LDB3O75112 727 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 PRSS56P0CW18 603 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 GGT1P19440 569 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 MAOAP21397 527 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 BDKRB2P30411 391 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SMAD4Q13485 552 aaKnown RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 C9orf135Q5VTT2 229 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SLC22A10Q63ZE4 541 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 ASRGL1Q7L266 308 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 MFSD6LQ8IWD5 586 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 APIPQ96GX9 242 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms