RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 CDC40O60508 579 aaKnown RBP eCLIP18.88■□□□□ 0.61
CD58-204ENST00000464088 HCN1O60741 890 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 SLC19A2O60779 497 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 HNRNPCL1O60812 293 aaKnown RBP18.88■□□□□ 0.61
CD58-204ENST00000464088 HNRNPCL4P0DMR1 293 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 MSX1P28360 303 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 CDK6Q00534 326 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 ZNF117Q03924 483 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 GNA13Q14344 377 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 EIPR1Q53HC9 387 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 CALHM3Q86XJ0 350 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 SPPL2CQ8IUH8 684 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 ZNF614Q8N883 585 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 FAM83FQ8NEG4 500 aaPredicted RBP18.88■□□□□ 0.61
CD58-204ENST00000464088 OR10A6Q8NH74 314 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 NFKBIDQ8NI38 313 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 SH3GL1Q99961 368 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 ENKD1Q9H0I2 346 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 ZNF835Q9Y2P0 537 aa18.88■□□□□ 0.61
CD58-204ENST00000464088 TRGV5A0A0B4J1U4 118 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 TMEM247A6NEH6 219 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 H3BNH8 94 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 ZNHIT1O43257 154 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 ZIC3O60481 467 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 BCAS1O75363 584 aaPredicted RBP18.87■□□□□ 0.61
CD58-204ENST00000464088 TRAPPC6AO75865 159 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 PGM3O95394 542 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 PGM1P36871 562 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 DSCR4P56555 118 aaPredicted RBP18.87■□□□□ 0.61
CD58-204ENST00000464088 RBBP4Q09028 425 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 C3AR1Q16581 482 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 NDUFAF6Q330K2 333 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 WIPI1Q5MNZ9 446 aaPredicted RBP18.87■□□□□ 0.61
CD58-204ENST00000464088 CBLN3Q6UW01 205 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 YRDCQ86U90 279 aaKnown RBP18.87■□□□□ 0.61
CD58-204ENST00000464088 ZZZ3Q8IYH5 903 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 FAM71CQ8NEG0 241 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 B4GALNT2Q8NHY0 566 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 BBS10Q8TAM1 723 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 NEIL3Q8TAT5 605 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 C1GALT1C1Q96EU7 318 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 TAGLN3Q9UI15 199 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 ICAM5Q9UMF0 924 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 CARD8Q9Y2G2 431 aa18.87■□□□□ 0.61
CD58-204ENST00000464088 CLDN24A6NM45 220 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 AQP7O14520 342 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 EIF4E2O60573 245 aaKnown RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 DBIP07108 87 aaKnown RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 UBL4AP11441 157 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 ESRRAP11474 423 aaPredicted RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 DPP4P27487 766 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 CPA2P48052 419 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 NUDT2P50583 147 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 KCNJ10P78508 379 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 TLE4Q04727 773 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 SCARB2Q14108 478 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 GANABQ14697 944 aaKnown RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 KRT72Q14CN4 511 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 CYP51A1Q16850 503 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 REEP3Q6NUK4 255 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 ARHGAP11AQ6P4F7 1023 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 Q6ZPB1 254 aaPredicted RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 DTNBP1Q96EV8 351 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 SH3YL1Q96HL8 342 aaPredicted RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 SPATA9Q9BWV2 254 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 RSPO3Q9BXY4 272 aaPredicted RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 PTGES2Q9H7Z7 377 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.86■□□□□ 0.61
CD58-204ENST00000464088 CMTM6Q9NX76 183 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 SPRR3Q9UBC9 169 aa18.86■□□□□ 0.61
CD58-204ENST00000464088 C15orf38-AP3S2A0A0A6YYH1 394 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 ZNF264O43296 627 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 HCRTR2O43614 444 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 DNAJA2O60884 412 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 CSTAP01040 98 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 NID1P14543 1247 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 P2RX1P51575 399 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 SUMO3P55854 103 aaPredicted RBP18.85■□□□□ 0.61
CD58-204ENST00000464088 B3GALT5-AS1P59052 145 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 SKP2Q13309 424 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 TOMM20Q15388 145 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 NHSL2Q5HYW2 709 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 ARSKQ6UWY0 536 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 EIF3MQ7L2H7 374 aaKnown RBP18.85■□□□□ 0.61
CD58-204ENST00000464088 ARPINQ7Z6K5 226 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 SLC15A3Q8IY34 581 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 PEX5LQ8IYB4 626 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 C11orf65Q8NCR3 313 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 HIPK4Q8NE63 616 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 OR52P1PQ8NH57 321 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 WDR60Q8WVS4 1066 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 ARSGQ96EG1 525 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 ZNF583Q96ND8 569 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 HOPXQ9BPY8 73 aaPredicted RBP18.85■□□□□ 0.61
CD58-204ENST00000464088 LAT2Q9GZY6 243 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 LDAHQ9H6V9 325 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 TAS2R10Q9NYW0 307 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 TINAGQ9UJW2 476 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 DKKL1Q9UK85 242 aa18.85■□□□□ 0.61
CD58-204ENST00000464088 SLC35A3Q9Y2D2 325 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms