RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SCMH1Q96GD3 660 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 TMEM41AQ96HV5 264 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 DHRS1Q96LJ7 313 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 PRORYQ9H606 182 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 DCLRE1BQ9H816 532 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 HHATLQ9HCP6 504 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 TIMMDC1Q9NPL8 285 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 SDHAF3Q9NRP4 125 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 AGPAT4Q9NRZ5 378 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 A4GNTQ9UNA3 340 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 TNRC6AQ8NDV7 1962 aaKnown RBP13.08□□□□□ -0.32
COL6A1-202ENST00000463060 ZZEF1O43149 2961 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 A0A0G2JMM0 328 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 A0A1W2PPB8 328 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 A0A1W2PRS3 328 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 KIR3DP1A8MWS1 328 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 J3KTA2 159 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 hCG_2039718K7EN88 272 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 ETV2O00321 342 aaPredicted RBP13.07□□□□□ -0.32
COL6A1-202ENST00000463060 AP3D1O14617 1153 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 SNPHO15079 494 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 HCRTR2O43614 444 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 NME2P1O60361 137 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 SLC25A12O75746 678 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 LYPD3O95274 346 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 PDGFAP04085 211 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 THY1P04216 161 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 P04436 131 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 ITGA2P17301 1181 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 RHCEP18577 417 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 NME2P22392 152 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 CD97P48960 835 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 HMGA2P52926 109 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 DLX5P56178 289 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 CXADRP78310 365 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 OR5M10Q6IEU7 315 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 SLC25A25Q6KCM7 469 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 OR2M3Q8NG83 312 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 OR5W2Q8NH69 310 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 B4GALNT2Q8NHY0 566 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 GPR119Q8TDV5 335 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 LRTOMTQ8WZ04 291 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 STMN2Q93045 179 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 ZNF347Q96SE7 839 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 MCHR1Q99705 422 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 PKP2Q99959 881 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 ZNF559Q9BR84 538 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 HES7Q9BYE0 225 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
COL6A1-202ENST00000463060 POLR2J3Q9H1A7 115 aaKnown RBP13.07□□□□□ -0.32
COL6A1-202ENST00000463060 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 KLRF1Q9NZS2 232 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 TESQ9UGI8 421 aaKnown RBP13.07□□□□□ -0.32
COL6A1-202ENST00000463060 SLC13A4Q9UKG4 626 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 NTNG1Q9Y2I2 539 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 CSAG2Q9Y5P2 127 aa13.07□□□□□ -0.32
COL6A1-202ENST00000463060 PINLYPA6NC86 204 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 MKRN2OSH3BPM6 223 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 K7EM74 188 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 CLOCKO15516 846 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 DIRAS1O95057 198 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 MST1P26927 711 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 SLC6A8P48029 635 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 DNASE1L1P49184 302 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 SUMO3P55854 103 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-202ENST00000463060 ARG2P78540 354 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 PIN1Q13526 163 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-202ENST00000463060 ATP6AP1Q15904 470 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 COL28A1Q2UY09 1125 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 ENTPD8Q5MY95 495 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 PLCZ1Q86YW0 608 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 SULF2Q8IWU5 870 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 PIK3C3Q8NEB9 887 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 EXTL1Q92935 676 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-202ENST00000463060 FUZQ9BT04 418 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 TRIM2Q9C040 744 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 ADAM19Q9H013 955 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 DSN1Q9H410 356 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 YY1AP1Q9H869 796 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 MAN2C1Q9NTJ4 1040 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 ACER3Q9NUN7 267 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 VNN3Q9NY84 501 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 MED11Q9P086 117 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 PPP4R1LQ9P1A2 415 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 STX18Q9P2W9 335 aaKnown RBP13.06□□□□□ -0.32
COL6A1-202ENST00000463060 DNAJB9Q9UBS3 223 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 NKX1-2Q9UD57 310 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-202ENST00000463060 RIMS3Q9UJD0 308 aa13.06□□□□□ -0.32
COL6A1-202ENST00000463060 ANKUB1A6NFN9 424 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 LRRC3CA6NJW4 275 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 G3V3Y1 287 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 CYP7B1O75881 506 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 WISP1O95388 367 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 CST1P01037 141 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 LINGO3P0C6S8 592 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms