RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ACTR3BQ9P1U1 418 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 PDP2Q9P2J9 529 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 ENTPD4Q9Y227 616 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 SNX8Q9Y5X2 465 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GMEB1Q9Y692 573 aa6.8□□□□□ -1.32
UBE4B-204ENST00000462658 GOLGA4Q13439 2230 aaKnown RBP6.8□□□□□ -1.32
UBE4B-204ENST00000462658 ELOVL7A1L3X0 281 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 FAM220BPB1ANY3 271 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 H0Y3Z8 333 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 H3BMH7 237 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 NTN3O00634 580 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CDX4O14627 284 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 ARPC2O15144 300 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 GMNNO75496 209 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 NSA2O95478 260 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 KRT75O95678 551 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 C1QCP02747 245 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 PEPDP12955 493 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 RNH1P13489 461 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 NCK1P16333 377 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 ACP1P24666 158 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 MPIP34949 423 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CHI3L1P36222 383 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CRATP43155 626 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CDK9P50750 372 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 XKP51811 444 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 AP2B1P63010 937 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 MRPS22P82650 360 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 SHC2P98077 582 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 ACY1Q03154 408 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 HSPB3Q12988 150 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 RCN1Q15293 331 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 RGNQ15493 299 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CEBPEQ15744 281 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 SNCBQ16143 134 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CYP51A1Q16850 503 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 BTBD16Q32M84 506 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 OR52E8Q6IFG1 317 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 LCN8Q6JVE9 175 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 LIN54Q6MZP7 749 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 ANGPTL8Q6UXH0 198 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 SERPINA11Q86U17 422 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 OR4N5Q8IXE1 308 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 MICU2Q8IYU8 434 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 SAMD14Q8IZD0 417 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 C10orf111Q8N326 155 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 ENDOVQ8N8Q3 282 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 OR5AK3PQ8NH89 298 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 PSMA8Q8TAA3 256 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 PNPT1Q8TCS8 783 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 PYDC1Q8WXC3 89 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 TANKQ92844 425 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF501Q96CX3 271 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 MMABQ96EY8 250 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CNRIP1Q96F85 164 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 REXO5Q96IC2 774 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 RSRC1Q96IZ7 334 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF681Q96N22 645 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CSF3RQ99062 836 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 TRIM4Q9C037 500 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 TP63Q9H3D4 680 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 RAD21L1Q9H4I0 556 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 RNPEPL1Q9HAU8 725 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 FANCEQ9HB96 536 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 S100A14Q9HCY8 104 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 FGF21Q9NSA1 209 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 SIRT3Q9NTG7 399 aaPredicted RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 CUTCQ9NTM9 273 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 HCN3Q9P1Z3 774 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 GRHPRQ9UBQ7 328 aa6.79□□□□□ -1.32
UBE4B-204ENST00000462658 MDC1Q14676 2089 aaKnown RBP6.79□□□□□ -1.32
UBE4B-204ENST00000462658 RNF103-CHMP3A0A140T963 221 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 TCRBV3S1A0A5B6 114 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 H0YIG0 161 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 CXCR6O00574 342 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF749O43361 778 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 KCNK5O95279 499 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 GPR75O95800 540 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 GP1BAP07359 652 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 CD59P13987 128 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 CPMP14384 443 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 PORP16435 677 aaPredicted RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 GGT1P19440 569 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 ATP6V1B2P21281 511 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 MPGP29372 298 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 CCT3P49368 545 aaKnown RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 MVDP53602 400 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 ARSFP54793 590 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 MAT1AQ00266 395 aaKnown RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 FOLH1Q04609 750 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 TRA2AQ13595 282 aaKnown RBP eCLIP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 SAXO2Q658L1 398 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 ZFP1Q6P2D0 407 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 ACSM6Q6P461 480 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 ERICH5Q6P6B1 374 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 C6orf120Q7Z4R8 191 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 RNF130Q86XS8 419 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 AQP12AQ8IXF9 295 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 LRRC25Q8N386 305 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms