RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 METP08581 1390 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 POGZQ7Z3K3 1410 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 IGHV3-35A0A0C4DH35 117 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 IGHV2-70DA0A0C4DH43 119 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 E7ESA3 106 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 G3V4G9 280 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 ARPC3O15145 178 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 PHF1O43189 567 aaPredicted RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 NUDT21O43809 227 aaKnown RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 F10P00742 488 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 UMPSP11172 480 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 RPS2P15880 293 aaKnown RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 IMPDH1P20839 514 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 CALB2P22676 271 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 PAX7P23759 505 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 PTBP1P26599 531 aaKnown RBP eCLIP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 PRKAR2BP31323 418 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 GRIA1P42261 906 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 RPL29P47914 159 aaKnown RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 TDO2P48775 406 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 IST1P53990 364 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 CNTN2Q02246 1040 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 RIPK1Q13546 671 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 PRR4Q16378 134 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 SLC22A6Q4U2R8 563 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 SBK1Q52WX2 424 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 CEP55Q53EZ4 464 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 UTF1Q5T230 341 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 ATF7IP2Q5U623 682 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 RSBN1Q5VWQ0 802 aaPredicted RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 SLC22A10Q63ZE4 541 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF57Q68EA5 555 aaPredicted RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 TFAP2EQ6VUC0 442 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 CCDC80Q76M96 950 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 KIAA1328Q86T90 577 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 TPRA1Q86W33 373 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 APOBEC3FQ8IUX4 373 aaKnown RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 LRRC75A-AS1Q8N1F1 130 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 CLEC4FQ8N1N0 589 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 LRRC43Q8N309 656 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 MTURNQ8N3F0 131 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 GPR137CQ8N3F9 429 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF525Q8N782 197 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 CCDC26Q8TAB7 109 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 M1APQ8TC57 530 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 TCTEX1D2Q8WW35 142 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 SHC3Q92529 594 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 PSMG2Q969U7 264 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 ZBTB18Q99592 522 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 MCHR1Q99705 422 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 NAT10Q9H0A0 1025 aaKnown RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 NXF5Q9H1B4 397 aaKnown RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 RHOJQ9H4E5 214 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 GORASP2Q9H8Y8 452 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 MEAF6Q9HAF1 191 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 MIEF1Q9NQG6 463 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 SMOXQ9NWM0 555 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 SMPD3Q9NY59 655 aaPredicted RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 APOBEC3BQ9UH17 382 aaKnown RBP2.32□□□□□ -2.04
HDAC6-212ENST00000461608 DCDC2Q9UHG0 476 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF221Q9UK13 617 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 PDE10AQ9Y233 779 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 NAALAD2Q9Y3Q0 740 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 HCFC1P51610 2035 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 GON4LQ3T8J9 2241 aa2.32□□□□□ -2.04
HDAC6-212ENST00000461608 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 FAM240BA0A1B0GVZ2 78 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 SAP18O00422 153 aaKnown RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 RIPK2O43353 540 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 EFNA2O43921 213 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 SNNO75324 88 aaPredicted RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 TBX6O95947 436 aaPredicted RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 LALBAP00709 142 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 PNMTP11086 282 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 HNF1AP20823 631 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 IDSP22304 550 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 UQCRC2P22695 453 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 LAP3P28838 519 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 NTSP30990 170 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 UGT1A3P35503 534 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 HMGCLP35914 325 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 KIR2DS2P43631 304 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 BDKRB1P46663 353 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 TAF6P49848 677 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 RPL23AP62750 156 aaKnown RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 CXCL6P80162 114 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 MRPS11P82912 194 aaKnown RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 HMGN5P82970 282 aaKnown RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 CHRNB3Q05901 458 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 FGL1Q08830 312 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 SLC10A7Q0GE19 358 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 LRRC74AQ0VAA2 488 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 ASPHQ12797 758 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 ASAH1Q13510 395 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 PAN3Q58A45 887 aaKnown RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 SLC25A30Q5SVS4 291 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 MARC1Q5VT66 337 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 PMF1Q6P1K2 205 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms