RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 BCL3P20749 454 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 HMGCLP35914 325 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 CSRP3P50461 194 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 RPL32P62910 135 aaKnown RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 VLDLRP98155 873 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 OTUD4Q01804 1114 aaKnown RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 CNTN2Q02246 1040 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 PAX2Q02962 417 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ZNF154Q13106 437 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 SERTAD2Q14140 314 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 KCNJ11Q14654 390 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 NDUFA9Q16795 377 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 TIMM50Q3ZCQ8 353 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 GLYR1Q49A26 553 aaPredicted RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 SLC22A6Q4U2R8 563 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 EIPR1Q53HC9 387 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 TCTEX1D4Q5JR98 221 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ZNF57Q68EA5 555 aaPredicted RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 PYHIN1Q6K0P9 492 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 RGS9BPQ6ZS82 235 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 MOB3BQ86TA1 216 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 CDC20BQ86Y33 519 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ANKFN1Q8N957 763 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 STXBP6Q8NFX7 210 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ADAMTS16Q8TE57 1224 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 FAM3CQ92520 227 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 SH3YL1Q96HL8 342 aaPredicted RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 TTC25Q96NG3 672 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 SIGLEC12Q96PQ1 595 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 CITED1Q99966 193 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 PYGO2Q9BRQ0 406 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ZSCAN5AQ9BUG6 496 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ZNF385DQ9H6B1 395 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ELOVL3Q9HB03 270 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 COX16Q9P0S2 106 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 PIPOXQ9P0Z9 390 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 RSPH14Q9UHP6 348 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 RASD1Q9Y272 281 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 L3MBTL1Q9Y468 752 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 ALG6Q9Y672 507 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 SLCO1B1Q9Y6L6 691 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 EPRSP07814 1512 aaKnown RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 CDK13Q14004 1512 aaKnown RBP2.91□□□□□ -1.94
CLK1-206ENST00000461326 CEP162Q5TB80 1403 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 POGZQ7Z3K3 1410 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 CFAP43Q8NDM7 1665 aa2.91□□□□□ -1.94
CLK1-206ENST00000461326 KDM6BO15054 1643 aa2.9□□□□□ -1.94
CLK1-206ENST00000461326 SAGE2PA6NJ88 616 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 CCT8L1PA6NM43 557 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 SRRM5B3KS81 715 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 E9PLD3 99 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 SAP18O00422 153 aaKnown RBP2.9□□□□□ -1.95
CLK1-206ENST00000461326 CRLF1O75462 422 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 NEBLO76041 1014 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 TM7SF2O76062 418 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 DUSP14O95147 198 aaKnown RBP2.9□□□□□ -1.95
CLK1-206ENST00000461326 OPN1MWP04001 364 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 STSP08842 583 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 OPN1MW2P0DN77 364 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 OPN1MW3P0DN78 364 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 ZNF44P15621 663 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 SERPINA2P20848 420 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 PAX7P23759 505 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 CD80P33681 288 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 BDKRB1P46663 353 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 DHPSP49366 369 aaPredicted RBP2.9□□□□□ -1.95
CLK1-206ENST00000461326 ARFIP1P53367 373 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 IST1P53990 364 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 ACTR1AP61163 376 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 EWSR1Q01844 656 aaKnown RBP eCLIP2.9□□□□□ -1.95
CLK1-206ENST00000461326 OC90Q02509 493 aaPredicted RBP2.9□□□□□ -1.95
CLK1-206ENST00000461326 IL24Q13007 206 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 CHIT1Q13231 466 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 DPYSL3Q14195 570 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 TGIF1Q15583 401 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 SYPL1Q16563 259 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 EXOC3L2Q2M3D2 409 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 CCDC152Q4G0S7 254 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 ATAD3CQ5T2N8 411 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 SLC22A10Q63ZE4 541 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 CYS1Q717R9 158 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 C16orf62Q7Z3J2 963 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 ACOT1Q86TX2 421 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 LCA5Q86VQ0 697 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 RHOXF1Q8NHV9 184 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 CNIH3Q8TBE1 160 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 M1APQ8TC57 530 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 TRUB1Q8WWH5 349 aaKnown RBP2.9□□□□□ -1.95
CLK1-206ENST00000461326 EMG1Q92979 244 aaKnown RBP2.9□□□□□ -1.95
CLK1-206ENST00000461326 C12orf66Q96MD2 445 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 OR5B2Q96R09 309 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 CCT8L2Q96SF2 557 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 SLC6A7Q99884 636 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 PAXXQ9BUH6 204 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 RHOJQ9H4E5 214 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 MEAF6Q9HAF1 191 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 APMAPQ9HDC9 416 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 NANSQ9NR45 359 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 WRAP73Q9P2S5 460 aaPredicted RBP2.9□□□□□ -1.95
CLK1-206ENST00000461326 TBK1Q9UHD2 729 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms