RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 PCGF2P35227 344 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 STARP49675 285 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 CCR4P51679 360 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 GFRA1P56159 465 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 PCBP3P57721 371 aaKnown RBP12.68□□□□□ -0.38
HDLBP-229ENST00000460826 EEF1A1P68104 462 aaKnown RBP12.68□□□□□ -0.38
HDLBP-229ENST00000460826 RBPJQ06330 500 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 CRYZQ08257 329 aaKnown RBP12.68□□□□□ -0.38
HDLBP-229ENST00000460826 GANABQ14697 944 aaKnown RBP12.68□□□□□ -0.38
HDLBP-229ENST00000460826 VMACQ2NL98 169 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 PLPPR5Q32ZL2 321 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 MRPL2Q5T653 305 aaKnown RBP12.68□□□□□ -0.38
HDLBP-229ENST00000460826 C1QL3Q5VWW1 255 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 Q6ZPB1 254 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-229ENST00000460826 CD163Q86VB7 1156 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 COMTD1Q86VU5 262 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 CLIP4Q8N3C7 705 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 OR5M9Q8NGP3 310 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 FAM57AQ8TBR7 257 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 POC1BQ8TC44 478 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 HOPXQ9BPY8 73 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-229ENST00000460826 HHATLQ9HCP6 504 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 PNPLA3Q9NST1 481 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 RLIMQ9NVW2 624 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 SH3BGRL2Q9UJC5 107 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 TINAGQ9UJW2 476 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 ANGPT4Q9Y264 503 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 SLC35A3Q9Y2D2 325 aa12.68□□□□□ -0.38
HDLBP-229ENST00000460826 SPTBN1Q01082 2364 aaKnown RBP12.67□□□□□ -0.38
HDLBP-229ENST00000460826 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 FAM220BPB1ANY3 271 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 TPST1O60507 370 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 DNAJA2O60884 412 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 NUDT14O95848 222 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 OPN1SWP03999 348 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 THBS1P07996 1170 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 LINGO3P0C6S8 592 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 ETS2P15036 469 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 ZNF41P51814 821 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-229ENST00000460826 SLC25A3Q00325 362 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 LIPEQ05469 1076 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 TMEM44Q2T9K0 475 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 LIN52Q52LA3 116 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 ZNF311Q5JNZ3 666 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 RAET1LQ5VY80 246 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 VASNQ6EMK4 673 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 ARPINQ7Z6K5 226 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 IFNEQ86WN2 208 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 DOLPP1Q86YN1 238 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 CMIPQ8IY22 773 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 ABTB1Q969K4 478 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-229ENST00000460826 SARAFQ96BY9 339 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 REXO5Q96IC2 774 aaKnown RBP12.67□□□□□ -0.38
HDLBP-229ENST00000460826 NSL1Q96IY1 281 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 SFXN2Q96NB2 322 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 SPATA9Q9BWV2 254 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 PACSIN3Q9UKS6 424 aa12.67□□□□□ -0.38
HDLBP-229ENST00000460826 NCOA6Q14686 2063 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 A0A087WZY1 265 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 TRGV8A0A0C4DH27 118 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 CDHR4A6H8M9 788 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 OR14I1A6ND48 311 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 AP3D1O14617 1153 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 FRS3O43559 492 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 EPPINO95925 133 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 STSP08842 583 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 ESRRAP11474 423 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 IL11P20809 199 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 PSMA4P25789 261 aaKnown RBP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 RYKP34925 604 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 GSK3BP49841 420 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 LHX2P50458 406 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 CRYBA2P53672 197 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 SUMO3P55854 103 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 SRSF1Q07955 248 aaKnown RBP eCLIP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 DMTNQ08495 405 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 FOXF1Q12946 379 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 LARS2Q15031 903 aaKnown RBP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 QPRTQ15274 297 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 GLYR1Q49A26 553 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 GXYLT1Q4G148 440 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 RNF220Q5VTB9 566 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 TRPM8Q7Z2W7 1104 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 MED12LQ86YW9 2145 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 MICU2Q8IYU8 434 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 TOR1AIP2Q8NFQ8 470 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 OR2T12Q8NG77 320 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 DTNBP1Q96EV8 351 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 DOCK7Q96N67 2140 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 TIMP4Q99727 224 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 EXOSC3Q9NQT5 275 aaKnown RBP12.66□□□□□ -0.38
HDLBP-229ENST00000460826 ABCD2Q9UBJ2 740 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 ACAD8Q9UKU7 415 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 IFT52Q9Y366 437 aa12.66□□□□□ -0.38
HDLBP-229ENST00000460826 ZNF337Q9Y3M9 751 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms