RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 AHCYL1O43865 530 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 CPNE3O75131 537 aaKnown RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 CNOT3O75175 753 aaKnown RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 TRMUO75648 421 aaKnown RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 MT-ND2P03891 347 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 HMGN1P05114 100 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 DLX5P56178 289 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 HOXC5Q00444 222 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 PIGFQ07326 219 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 NEDD8Q15843 81 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 TMEM44Q2T9K0 475 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 SLC29A4Q7RTT9 530 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 CLVS1Q8IUQ0 354 aaPredicted RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 SLC34A3Q8N130 599 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 APCDD1LQ8NCL9 501 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 OR8D4Q8NGM9 314 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 TEX47Q8TBZ9 253 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 TMEM163Q8TC26 289 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 RAB2BQ8WUD1 216 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 TMEM255BQ8WV15 326 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 RORBQ92753 470 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 ISOC1Q96CN7 298 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 CLIP3Q96DZ5 547 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 YIPF6Q96EC8 236 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 FAM46AQ96IP4 442 aaKnown RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 TSC22D3Q99576 134 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 PLA2G12AQ9BZM1 189 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 SLC19A3Q9BZV2 496 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 SLC7A5P2Q9GIP4 190 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 YIPF3Q9GZM5 350 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 LAT2Q9GZY6 243 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 ADAM19Q9H013 955 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 RACGAP1Q9H0H5 632 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 MEPEQ9NQ76 525 aaPredicted RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 RXFP3Q9NSD7 469 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 COPS7AQ9UBW8 275 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 BAIAP2Q9UQB8 552 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 MED31Q9Y3C7 131 aa7.4□□□□□ -1.22
SFPQ-202ENST00000460428 RPL36Q9Y3U8 105 aaKnown RBP7.4□□□□□ -1.22
SFPQ-202ENST00000460428 KMT2EQ8IZD2 1858 aa7.4□□□□□ -1.23
SFPQ-202ENST00000460428 LNP1A1A4G5 178 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 IRGMA1A4Y4 181 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 UNC119BA6NIH7 251 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SNTNA6NMZ2 147 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 A8MUA0 341 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 H3BMQ9 156 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 TMX2-CTNND1H3BSU7 103 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SCDO00767 359 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 BHLHE40O14503 412 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 CDC42EP2O14613 210 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SURF4O15260 269 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 PRODHO43272 600 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 ZNF264O43296 627 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 GALR2O43603 387 aaPredicted RBP7.39□□□□□ -1.23
SFPQ-202ENST00000460428 PRKYO43930 277 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 FADS1O60427 444 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 EIF4E2O60573 245 aaKnown RBP7.39□□□□□ -1.23
SFPQ-202ENST00000460428 CBFA2T3O75081 653 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 ENTPD6O75354 484 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 INMTO95050 263 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 GABARAPO95166 117 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 RCBTB2O95199 551 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 UTS2O95399 124 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SOX14O95416 240 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 CSTAP01040 98 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 HEXBP07686 556 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 CD63P08962 238 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 ZNF806P0C7X5 589 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 PNMTP11086 282 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 CD59P13987 128 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 MAKP20794 623 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 POU1F1P28069 291 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 C21orf33P30042 268 aaPredicted RBP7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SLC6A8P48029 635 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SLC9A3P48764 834 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 LIMK1P53667 647 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 GAS1P54826 345 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 EMP2P54851 167 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 FXYD6P3P58550 94 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 RNF4P78317 190 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 E2F1Q01094 437 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 ST3GAL4Q11206 333 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SKP2Q13309 424 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 TMED1Q13445 227 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 ISXQ2M1V0 245 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 ANKDD1AQ495B1 522 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 SYT14P1Q58G82 188 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 ALG10BQ5I7T1 473 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 PHF19Q5T6S3 580 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 AADACL4Q5VUY2 407 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 HLA-DQA1Q5Y7H0 255 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 PLAG1Q6DJT9 500 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 WBP2NLQ6ICG8 309 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 C19orf48Q6RUI8 117 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 APOOLQ6UXV4 268 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 LANCL3Q6ZV70 420 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 AHSA2Q719I0 299 aa7.39□□□□□ -1.23
SFPQ-202ENST00000460428 MISPQ8IVT2 679 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms