RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KRTAP12-2P59991 146 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 ASAH1Q13510 395 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 PEX6Q13608 980 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 CHI3L2Q15782 390 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 SLC15A2Q16348 729 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 GLYR1Q49A26 553 aaPredicted RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 CELF3Q5SZQ8 465 aaKnown RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 SLC22A10Q63ZE4 541 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 SULT1C3Q6IMI6 304 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 LANCL3Q6ZV70 420 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 IFNEQ86WN2 208 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 CENPLQ8N0S6 344 aaPredicted RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 TEX9Q8N6V9 391 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 CSNK1A1LQ8N752 337 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 CCDC26Q8TAB7 109 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 M1APQ8TC57 530 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 FAM122AQ96E09 287 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 C4orf36Q96KX1 117 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 THUMPD2Q9BTF0 503 aaKnown RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 DEFB126Q9BYW3 111 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 ELOVL4Q9GZR5 314 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 TNFRSF19Q9NS68 423 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 RDH8Q9NYR8 311 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 ANAPC7Q9UJX3 599 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 PKD1L2Q7Z442 2459 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 NWD2Q9ULI1 1742 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 TROQ12816 1431 aaPredicted RBP2.5□□□□□ -2.01
RFC4-211ENST00000460408 PREX2Q70Z35 1606 aa2.5□□□□□ -2.01
RFC4-211ENST00000460408 SF3B1O75533 1304 aaKnown RBP eCLIP2.49□□□□□ -2.012e-6■■■■■ 37.9
RFC4-211ENST00000460408 SAGE2PA6NJ88 616 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 K7ENP7 123 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 CLDN5O00501 218 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 B3GAT3O94766 335 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 NOL4O94818 638 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 UFL1O94874 794 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 IGF1P05019 195 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 PDHBP11177 359 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 PTBP1P26599 531 aaKnown RBP eCLIP2.49□□□□□ -2.01
RFC4-211ENST00000460408 HPDP32754 393 aaPredicted RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 KIF5BP33176 963 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 DLSTP36957 453 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 NOVA1P51513 510 aaKnown RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 OSTNP61366 133 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 MAP2K1Q02750 393 aaPredicted RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 SERTAD2Q14140 314 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 ATXN7L3Q14CW9 347 aaPredicted RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 HSP90AA5PQ58FG0 334 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 DNAJC21Q5F1R6 531 aaKnown RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 SERPINA9Q86WD7 417 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 GPD1LQ8N335 351 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 FBXL16Q8N461 479 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 CD177Q8N6Q3 437 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 ZPLD1Q8TCW7 415 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 RSPH1Q8WYR4 309 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 SYAP1Q96A49 352 aaPredicted RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 DTNBP1Q96EV8 351 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 NFKBIZQ9BYH8 718 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 RHOJQ9H4E5 214 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 DHX33Q9H6R0 707 aaKnown RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 PNO1Q9NRX1 252 aaKnown RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 MRPL39Q9NYK5 338 aaKnown RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 DPM3Q9P2X0 92 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 ABCD2Q9UBJ2 740 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 ISY1Q9ULR0 285 aaKnown RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 CHMP2BQ9UQN3 213 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 NOS1P29475 1434 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 ADGRL3Q9HAR2 1447 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 USP32Q8NFA0 1604 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 PTPN23Q9H3S7 1636 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 RGPD3A6NKT7 1758 aaPredicted RBP2.49□□□□□ -2.01
RFC4-211ENST00000460408 RGPD4Q7Z3J3 1758 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 PLEKHG2Q9H7P9 1386 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 KIF15Q9NS87 1388 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 PLEKHG1Q9ULL1 1385 aa2.49□□□□□ -2.01
RFC4-211ENST00000460408 CDC42BPBQ9Y5S2 1711 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 PPIAL4CA0A0B4J2A2 164 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 FAM74A7A6NL05 159 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 ANGPT2O15123 496 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 MAPK13O15264 365 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 PEX11AO75192 247 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 SCRG1O75711 98 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 NEBLO76041 1014 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 ANP32DO95626 131 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 GUCA1CO95843 209 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 ASNSP08243 561 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 HBQ1P09105 142 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 P0C879 139 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 PPIAL4GP0DN37 164 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 DESP17661 470 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 TPSB2P20231 275 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 BDKRB1P46663 353 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 STARP49675 285 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 CD47Q08722 323 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 KLHL30Q0D2K2 578 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 OVGP1Q12889 678 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 KCNJ11Q14654 390 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 TPSAB1Q15661 275 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 GSG1Q2KHT4 349 aa2.48□□□□□ -2.01
RFC4-211ENST00000460408 FAM74A3Q4VXF1 159 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms