RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 LMF2Q9BU23 707 aaKnown RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 MCCC2Q9HCC0 563 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 TREM1Q9NP99 234 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 HPF1Q9NWY4 346 aa13.82□□□□□ -0.2
PTPRU-205ENST00000460170 THAP10Q9P2Z0 257 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ATXN7L1Q9ULK2 861 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-205ENST00000460170 ADPRMQ3LIE5 342 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 UBQLNLQ8IYU4 475 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 OR9A4Q8NGU2 314 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 FAM46BQ96A09 425 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 OR1F2PQ96R84 312 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 SLC6A7Q99884 636 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 MRI1Q9BV20 369 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 IKZF5Q9H5V7 419 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 C2orf42Q9NWW7 574 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 A0A1B0GTW7 788 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 GABRA5P31644 462 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 DUSP3P51452 185 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-205ENST00000460170 SLC35A2P78381 396 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 FAM69BQ5VUD6 431 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 PHC2Q8IXK0 858 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 PRR22Q8IZ63 422 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 OR5J2Q8NH18 312 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 PMM1Q92871 262 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 MLXQ9UH92 298 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 APOC1P02654 83 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 LIPAP38571 399 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 PSMB10P40306 273 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 HTR2BP41595 481 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 FNTBP49356 437 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 GALK2Q01415 458 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF77Q15935 545 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 SPIN3Q5JUX0 258 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 NOXA1Q86UR1 476 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 OR2T35Q8NGX2 323 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF417Q8TAU3 575 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 DEDD2Q8WXF8 326 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.81□□□□□ -0.25e-7■□□□□ 10
PTPRU-205ENST00000460170 TM7SF3Q9NS93 570 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 PCDHGA6Q9Y5G7 932 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 GFRA2O00451 464 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 GABRPO00591 440 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 CCNOP22674 350 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 SLC1A3P43003 542 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 PLK5Q496M5 336 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 ABHD17CQ6PCB6 329 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 TMEM184AQ6ZMB5 413 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 ANKRD33Q7Z3H0 272 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 OR6T1Q8NGN1 323 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 PITX2Q99697 317 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF350Q9GZX5 532 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF385DQ9H6B1 395 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 SUSD2Q9UGT4 822 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 CBLCQ9ULV8 474 aa13.81□□□□□ -0.2
PTPRU-205ENST00000460170 OR2A25A4D2G3 310 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 HOXC11O43248 304 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-205ENST00000460170 OR2T1O43869 369 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 PRKRAO75569 313 aaKnown RBP13.8□□□□□ -0.2
PTPRU-205ENST00000460170 PVALBP20472 110 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-205ENST00000460170 PRSS3P35030 304 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 LRRC26Q2I0M4 334 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 SLX4IPQ5VYV7 408 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 DIO2Q92813 273 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-205ENST00000460170 MBOAT4Q96T53 435 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 TAAR2Q9P1P5 351 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 HMX3A6NHT5 357 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 B3GALT4O96024 378 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 HNRNPFP52597 415 aaKnown RBP13.8□□□□□ -0.2
PTPRU-205ENST00000460170 HERV-K104P61576 105 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 DUSP7Q16829 419 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 Q6ZNX1 250 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 LRRC28Q86X40 367 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF565Q8N9K5 539 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 LMF1Q96S06 567 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 C19orf43Q9BQ61 176 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 MGAT4AQ9UM21 535 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF337Q9Y3M9 751 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 ATG4BQ9Y4P1 393 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 NUBP2Q9Y5Y2 271 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 K7ESM1 405 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 UGT2B7P16662 529 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 CRABP1P29762 137 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 LTB4RQ15722 352 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 NKAPLQ5M9Q1 402 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 FAM111BQ6SJ93 734 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 OR13C2Q8NGS9 318 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 ADOQ96SZ5 270 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 TMEM168Q9H0V1 697 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 SYT4Q9H2B2 425 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 DIMT1Q9UNQ2 313 aaKnown RBP13.8□□□□□ -0.2
PTPRU-205ENST00000460170 FBXO45P0C2W1 286 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 NUDT1P36639 197 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 PTH2RP49190 550 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 YPEL5P62699 121 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 CHRFAM7AQ494W8 412 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 METRNLQ641Q3 311 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 MBOAT2Q6ZWT7 520 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms