RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 C8orf33Q9H7E9 229 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 POLMQ9NP87 494 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 MKKSQ9NPJ1 570 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 CYSLTR2Q9NS75 346 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 EMC3Q9P0I2 261 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 ABRACLQ9P1F3 81 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF624Q9P2J8 865 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 COMMD3Q9UBI1 195 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 POU2F3Q9UKI9 436 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 SIGLEC7Q9Y286 467 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 N6AMT1Q9Y5N5 214 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 LAMA2P24043 3122 aaKnown RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 EYSQ5T1H1 3165 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 TRAV1-2A0A0B4J238 106 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 A0A0B4J2E0 115 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 A0A1B0GX12 115 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 GXYLT2A0PJZ3 443 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 EFCAB7A8K855 629 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 LRRTM2O43300 516 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 FRS3O43559 492 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 LATO43561 262 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 GPRIN2O60269 458 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 OR10H2O60403 315 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 GALR3O60755 368 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 HPGDSO60760 199 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 TPPPO94811 219 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 RASGRP1O95267 797 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ZIC2O95409 532 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 CLEC2LP0C7M8 214 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 OR2T7P0C7T2 308 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 NPR2P20594 1047 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 NOS3P29474 1203 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 GALNSP34059 522 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 MAP3K8P41279 467 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 BLKP51451 505 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 GBX2P52951 348 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 RAG2P55895 527 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 SRP54P61011 504 aaKnown RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 RPS7P62081 194 aaKnown RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 SIM1P81133 766 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 MAP4K2Q12851 820 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 IL10RAQ13651 578 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 RUNX2Q13950 521 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 DOC2BQ14184 412 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 GGTLC2Q14390 218 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 PRICKLE4Q2TBC4 344 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF791Q3KP31 576 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 CCDC58Q4VC31 144 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 FLYWCH1Q4VC44 716 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ZMAT1Q5H9K5 638 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 TMEM196Q5HYL7 178 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 UBE2Q1Q7Z7E8 422 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 CSNK1A1LQ8N752 337 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 OR10H4Q8NGA5 316 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 OR2T27Q8NH04 317 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 OR5W2Q8NH69 310 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ZCCHC10Q8TBK6 192 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 RFT1Q96AA3 541 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 CTHRC1Q96CG8 243 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ERLEC1Q96DZ1 483 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 MACROD1Q9BQ69 325 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF649Q9BS31 505 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF426Q9BUY5 554 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 DPH1Q9BZG8 443 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 MIR1-1HGQ9H1L0 117 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 TP63Q9H3D4 680 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 IL21RQ9HBE5 538 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 ADAP2Q9NPF8 381 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 CLDND1Q9NY35 253 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 STMN3Q9NZ72 180 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 MAT2BQ9NZL9 334 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 RPS6KB2Q9UBS0 482 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 SERTAD3Q9UJW9 196 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 NDRG2Q9UN36 371 aaKnown RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 CSNK1G3Q9Y6M4 447 aa8.2□□□□□ -1.1
HDAC3-202ENST00000459727 NUP214P35658 2090 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-202ENST00000459727 OR6C74A6NCV1 312 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SYNDIG1LA6NDD5 238 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF879B4DU55 563 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PRAMEF26H0Y7S4 382 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 H0YGG7 62 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 DLL1O00548 723 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 CYR61O00622 381 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 CLDN4O14493 209 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SOCS6O14544 535 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 CDC42EP2O14613 210 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PDCD5O14737 125 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 TFECO14948 347 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PIP5K1CO60331 668 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PRAMEF2O60811 474 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 NDUFB2O95178 105 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 KLF8O95600 359 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 CH25HO95992 272 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 DHFRP00374 187 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 C1QBP02746 253 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 STATHP02808 62 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 THY1P04216 161 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SBK2P0C263 348 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms