RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 WDR45Q9Y484 360 aa15.78■□□□□ 0.12
SCARNA2-201ENST00000458748 NPIPA5A0A0B4J1W7 369 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 A0A1W2PNV4 684 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 NPIPA7E9PJI5 369 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 PLGP00747 810 aaPredicted RBP15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 PABPC4LP0CB38 370 aaKnown RBP15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 NPIPA8P0DM63 369 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 H2AFXP16104 143 aaPredicted RBP15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 CCR4P51679 360 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 PPP2R2AP63151 447 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 IRX1P78414 480 aaPredicted RBP15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 FOXF2Q12947 444 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 GPAT3Q53EU6 434 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 TTMPQ5BVD1 217 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 PDZK1Q5T2W1 519 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 GTF2IRD2BQ6EKJ0 949 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 PPP4R4Q6NUP7 873 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 EPGNQ6UW88 154 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 GTF2IRD2Q86UP8 949 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 OR5W2Q8NH69 310 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 PMM1Q92871 262 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 ROPN1LQ96C74 230 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 REXO5Q96IC2 774 aaKnown RBP15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 ITCHQ96J02 903 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 MRGPRX4Q96LA9 322 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 RBM24Q9BX46 236 aaKnown RBP15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 SERHL2Q9H4I8 314 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 TCF7L2Q9NQB0 619 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 MKLN1Q9UL63 735 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 ICAM5Q9UMF0 924 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 SLC35A3Q9Y2D2 325 aa15.77■□□□□ 0.12
SCARNA2-201ENST00000458748 CSMD2Q7Z408 3487 aa15.77■□□□□ 0.11
SCARNA2-201ENST00000458748 SHISA8B8ZZ34 492 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 MSTNO14793 375 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 ADAMDEC1O15204 470 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 CSTAP01040 98 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 LINGO3P0C6S8 592 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 POLR2JP52435 117 aaKnown RBP15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 GNA13Q14344 377 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 LUZP2Q86TE4 346 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 CDH24Q86UP0 819 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 GGNQ86UU5 652 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 RNF130Q86XS8 419 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 LILRA2Q8N149 483 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 ZNF619Q8N2I2 560 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 OR2V1Q8NHB1 315 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 RFWD2Q8NHY2 731 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 FNDC9Q8TBE3 224 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 TMEM234Q8WY98 164 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 FIG4Q92562 907 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 TRNT1Q96Q11 434 aaKnown RBP15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 OR52B2Q96RD2 323 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 SLC39A3Q9BRY0 314 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 LAT2Q9GZY6 243 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 RNF122Q9H9V4 155 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 FANCFQ9NPI8 374 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 GLRX2Q9NS18 164 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 THUMPD1Q9NXG2 353 aaKnown RBP15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 EDARQ9UNE0 448 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 EMC9Q9Y3B6 208 aa15.76■□□□□ 0.11
SCARNA2-201ENST00000458748 FAM234BA2RU67 622 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 TMEM247A6NEH6 219 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 H0YC42 278 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 ZNF195O14628 629 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 KIAA0513O60268 411 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 FCMRO60667 390 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 UGT2B17O75795 530 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 CYP7B1O75881 506 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 SMNDC1O75940 238 aaKnown RBP eCLIP15.75■□□□□ 0.11not detected■■■■■ 75.3
SCARNA2-201ENST00000458748 PGCP20142 388 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 PSMA4P25789 261 aaKnown RBP15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 IL12AP29459 219 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 CASP9P55211 416 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 TPD52P55327 224 aaPredicted RBP15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 AP1ARQ63HQ0 302 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 HBMQ6B0K9 141 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 CBLN3Q6UW01 205 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 MAVSQ7Z434 540 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 ZZZ3Q8IYH5 903 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 OR10D3Q8NH80 312 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 GPR119Q8TDV5 335 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 ST8SIA1Q92185 356 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 RAB8BQ92930 207 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 ARSGQ96EG1 525 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 ZNF845Q96IR2 970 aaPredicted RBP15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 MARK4Q96L34 752 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 KLHL15Q96M94 604 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 CCDC28BQ9BUN5 200 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 SAP130Q9H0E3 1048 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 CACYBPQ9HB71 228 aaKnown RBP15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 SERINC1Q9NRX5 453 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 CRIM1Q9NZV1 1036 aa15.75■□□□□ 0.11
SCARNA2-201ENST00000458748 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.74■□□□□ 0.11
SCARNA2-201ENST00000458748 C9JVG2 144 aa15.74■□□□□ 0.11
SCARNA2-201ENST00000458748 HMGN4O00479 90 aa15.74■□□□□ 0.11
SCARNA2-201ENST00000458748 TNFSF13O75888 250 aa15.74■□□□□ 0.11
SCARNA2-201ENST00000458748 GOSR1O95249 250 aa15.74■□□□□ 0.11
SCARNA2-201ENST00000458748 ZCCHC18P0CG32 403 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms