RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CDC73Q6P1J9 531 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 FCRLAQ7L513 359 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 EIF1ADQ8N9N8 165 aaKnown RBP19.16■□□□□ 0.66
CPNE1-220ENST00000458038 ABHD3Q8WU67 409 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 ARL8AQ96BM9 186 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 CHMP6Q96FZ7 201 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 DNAJC15Q9Y5T4 150 aa19.16■□□□□ 0.66
CPNE1-220ENST00000458038 FBN1P35555 2871 aaKnown RBP19.15■□□□□ 0.66
CPNE1-220ENST00000458038 STAB1Q9NY15 2570 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 TRIM13O60858 407 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 CRLF1O75462 422 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 FOXF1Q12946 379 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 ITGADQ13349 1161 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 CLEC12BQ2HXU8 276 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 TMEM176BQ3YBM2 270 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-220ENST00000458038 CCNJQ5T5M9 372 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 KANK2Q63ZY3 851 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 HEPHL1Q6MZM0 1159 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 C10orf107Q8IVU9 208 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 TUSC5Q8IXB3 177 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 OR56A1Q8NGH5 318 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 CLHC1Q8NHS4 586 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 PSMA8Q8TAA3 256 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 RAB3IL1Q8TBN0 382 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 CDS1Q92903 461 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 KISS1RQ969F8 398 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-220ENST00000458038 MRGPRX4Q96LA9 322 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 ACTRT3Q9BYD9 372 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 TUBB1Q9H4B7 451 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 SIRT3Q9NTG7 399 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-220ENST00000458038 ATAD3AQ9NVI7 634 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 ICAM5Q9UMF0 924 aa19.15■□□□□ 0.66
CPNE1-220ENST00000458038 FAF1Q9UNN5 650 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-220ENST00000458038 GTPBP1O00178 669 aaKnown RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 DANCRP0C864 163 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 KRT4P19013 534 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 CCT3P49368 545 aaKnown RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 ATP12AP54707 1039 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 RAC3P60763 192 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 LASP1Q14847 261 aaKnown RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 TAB1Q15750 504 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 LSM12Q3MHD2 195 aaKnown RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 GALNTL6Q49A17 601 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 ALKBH2Q6NS38 261 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 NUFIP2Q7Z417 695 aaKnown RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 LILRB1Q8NHL6 650 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 FBXO27Q8NI29 283 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 KIF18AQ8NI77 898 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 GPR119Q8TDV5 335 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 ADAMTS15Q8TE58 950 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 ZFP90Q8TF47 636 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 SMAP2Q8WU79 429 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 OR5P2Q8WZ92 322 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 MOAP1Q96BY2 351 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 PPP3R2Q96LZ3 170 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 GATA5Q9BWX5 397 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 SRXN1Q9BYN0 137 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 EML4Q9HC35 981 aaKnown RBP19.14■□□□□ 0.65
CPNE1-220ENST00000458038 KLHL9Q9P2J3 617 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 FIS1Q9Y3D6 152 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 PLCE1Q9P212 2302 aa19.14■□□□□ 0.65
CPNE1-220ENST00000458038 SCAMP2O15127 329 aaKnown RBP19.13■□□□□ 0.65
CPNE1-220ENST00000458038 EFNA2O43921 213 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 LYPLA1O75608 230 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-220ENST00000458038 SHC1P29353 583 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 SELENBP1Q13228 472 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 VEZF1Q14119 521 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 ZNF672Q499Z4 452 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-220ENST00000458038 SLC25A53Q5H9E4 307 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 DCST2Q5T1A1 773 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 Q6ZT83 130 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 CXXC5Q7LFL8 322 aaKnown RBP19.13■□□□□ 0.65
CPNE1-220ENST00000458038 DDIASQ8IXT1 998 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 BANPQ8N9N5 519 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 PIWIL2Q8TC59 973 aaKnown RBP19.13■□□□□ 0.65
CPNE1-220ENST00000458038 GTPBP3Q969Y2 492 aaKnown RBP19.13■□□□□ 0.65
CPNE1-220ENST00000458038 PRPF18Q99633 342 aaKnown RBP19.13■□□□□ 0.65
CPNE1-220ENST00000458038 KLHDC3Q9BQ90 382 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 POTEKPQ9BYX7 375 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 GRIP2Q9C0E4 1043 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 BCO1Q9HAY6 547 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 CARD8Q9Y2G2 431 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 DTNAQ9Y4J8 743 aa19.13■□□□□ 0.65
CPNE1-220ENST00000458038 A0A1W2PP18 115 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 CLOCKO15516 846 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 EIF4E2O60573 245 aaKnown RBP19.12■□□□□ 0.65
CPNE1-220ENST00000458038 NTN1O95631 604 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 ADAP00813 363 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 TP53P04637 393 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-220ENST00000458038 SLC7A1P30825 629 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 DMTNQ08495 405 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 PCLAFQ15004 111 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 BHLHB9Q6PI77 547 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 CBLN3Q6UW01 205 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 TOR1AIP2Q8NFQ8 470 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 SFXN5Q8TD22 340 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 TWIST2Q8WVJ9 160 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 OTUB1Q96FW1 271 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-220ENST00000458038 RHOXF2Q9BQY4 288 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 REG4Q9BYZ8 158 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms