RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CCDC167Q9P0B6 97 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 ICAM5Q9UMF0 924 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 DOCK7Q96N67 2140 aa20.89■□□□□ 0.94
CBX3-204ENST00000456948 SYT5O00445 386 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 EIF1AYO14602 144 aaKnown RBP20.89■□□□□ 0.93
CBX3-204ENST00000456948 KIAA0513O60268 411 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 EDF1O60869 148 aaKnown RBP20.89■□□□□ 0.93
CBX3-204ENST00000456948 NCF2P19878 526 aaPredicted RBP20.89■□□□□ 0.93
CBX3-204ENST00000456948 ELK4P28324 431 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 TFF3Q07654 80 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 FGFBP1Q14512 234 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 BLOC1S3Q6QNY0 202 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 LRRC74BQ6ZQY2 392 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 ESPNLQ6ZVH7 1005 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 NAXEQ8NCW5 288 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 PNPT1Q8TCS8 783 aaKnown RBP20.89■□□□□ 0.93
CBX3-204ENST00000456948 INTS12Q96CB8 462 aaKnown RBP20.89■□□□□ 0.93
CBX3-204ENST00000456948 SPDL1Q96EA4 605 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 ARSGQ96EG1 525 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 MRGPRX4Q96LA9 322 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 RNF145Q96MT1 663 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 PINK1Q9BXM7 581 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 PIGMQ9H3S5 423 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 TIGARQ9NQ88 270 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 P2RX2Q9UBL9 471 aa20.89■□□□□ 0.93
CBX3-204ENST00000456948 ITPR2Q14571 2701 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 SYNGR4O95473 234 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 H6PDO95479 791 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 LINGO3P0C6S8 592 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 TROVE2P10155 538 aaKnown RBP eCLIP20.88■□□□□ 0.93
CBX3-204ENST00000456948 PGCP20142 388 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 UQCRC1P31930 480 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 EIF1AXP47813 144 aaKnown RBP20.88■□□□□ 0.93
CBX3-204ENST00000456948 SUCLG1P53597 346 aaKnown RBP20.88■□□□□ 0.93
CBX3-204ENST00000456948 CLDN15P56746 228 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 CBLN3Q6UW01 205 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 KIF18BQ86Y91 864 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 METTL25Q8N6Q8 603 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 GPR119Q8TDV5 335 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 RNASE6Q93091 150 aaKnown RBP20.88■□□□□ 0.93
CBX3-204ENST00000456948 NPHS2Q9NP85 383 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 ZNF446Q9NWS9 450 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 DCTN4Q9UJW0 460 aa20.88■□□□□ 0.93
CBX3-204ENST00000456948 MCTS1Q9ULC4 181 aaKnown RBP20.88■□□□□ 0.93
CBX3-204ENST00000456948 HCFC1P51610 2035 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 UQCRHLA0A096LP55 91 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 A0A0G2JND7 137 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 KDM4EB2RXH2 506 aaPredicted RBP20.87■□□□□ 0.93
CBX3-204ENST00000456948 SHISA8B8ZZ34 492 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 EEF1E1-BLOC1S5C9J1V9 151 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 NR5A2O00482 541 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 EEF1E1O43324 174 aaKnown RBP20.87■□□□□ 0.93
CBX3-204ENST00000456948 ATP8B1O43520 1251 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 PPIBP23284 216 aaKnown RBP20.87■□□□□ 0.93
CBX3-204ENST00000456948 CLDN20P56880 219 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 KCNJ10P78508 379 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 CHRNEQ04844 493 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 AGKQ53H12 422 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 METTL21CQ5VZV1 264 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 GTF2IRD2BQ6EKJ0 949 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 PPP4R4Q6NUP7 873 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 GTF2IRD2Q86UP8 949 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 DMRTC2Q8IXT2 367 aaPredicted RBP20.87■□□□□ 0.93
CBX3-204ENST00000456948 CMIPQ8IY22 773 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 PEX5LQ8IYB4 626 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 LILRA2Q8N149 483 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 GTF2H4Q92759 462 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 REXO5Q96IC2 774 aaKnown RBP20.87■□□□□ 0.93
CBX3-204ENST00000456948 NPDC1Q9NQX5 325 aaPredicted RBP20.87■□□□□ 0.93
CBX3-204ENST00000456948 SERINC1Q9NRX5 453 aa20.87■□□□□ 0.93
CBX3-204ENST00000456948 A0A096LPI6 279 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 UBTFL6P0CB48 400 aaPredicted RBP20.86■□□□□ 0.93
CBX3-204ENST00000456948 PRF1P14222 555 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 SLC6A8P48029 635 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 RNF144AP50876 292 aaPredicted RBP20.86■□□□□ 0.93
CBX3-204ENST00000456948 CRISP3P54108 245 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 DSTNP60981 165 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 PON3Q15166 354 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 SYPL1Q16563 259 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 FBXL19-AS1Q494R0 122 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 FRRS1Q6ZNA5 592 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 ACBD4Q8NC06 268 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 FBXO27Q8NI29 283 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 ST8SIA1Q92185 356 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 C14orf79Q96F83 325 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 THOC1Q96FV9 657 aaKnown RBP20.86■□□□□ 0.93
CBX3-204ENST00000456948 THUMPD3Q9BV44 507 aaKnown RBP20.86■□□□□ 0.93
CBX3-204ENST00000456948 ARMC7Q9H6L4 198 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 KCNN3Q9UGI6 736 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 L3MBTL1Q9Y468 752 aa20.86■□□□□ 0.93
CBX3-204ENST00000456948 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 CLIC1O00299 241 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 ADAMDEC1O15204 470 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 TGM6O95932 706 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 DBIP07108 87 aaKnown RBP20.85■□□□□ 0.93
CBX3-204ENST00000456948 PABPC4LP0CB38 370 aaKnown RBP20.85■□□□□ 0.93
CBX3-204ENST00000456948 UQCRBP14927 111 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 IL7RP16871 459 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 IGFBP2P18065 325 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 PSMA4P25789 261 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms