RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FAM183AA6NL82 134 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 OR5K4A6NMS3 321 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 PRAMEF26H0Y7S4 382 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 CHST10O43529 356 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 AKAP8O43823 692 aaKnown RBP17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 NKX2-2O95096 273 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 CBX7O95931 251 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 RNF144AP50876 292 aaPredicted RBP17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 RAB38P57729 211 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 VSX2P58304 361 aaPredicted RBP17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 ZNF791Q3KP31 576 aaPredicted RBP17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 XKRXQ6PP77 449 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 ZNF322Q6U7Q0 402 aaPredicted RBP17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 DGAT2L6Q6ZPD8 337 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 TMPRSS11FQ6ZWK6 438 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 ZAR1Q86SH2 424 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 GID4Q8IVV7 300 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 SIRT6Q8N6T7 355 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 FANK1Q8TC84 345 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 TMEM246Q9BRR3 403 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 FN3KQ9H479 309 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 TIGARQ9NQ88 270 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 CD207Q9UJ71 328 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 MMP17Q9ULZ9 603 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 A0A1W2PQ09 198 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 HMX3A6NHT5 357 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 SGK494L7N484 410 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 NDUFB5O43674 189 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 GARNL3Q5VVW2 1013 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 VASNQ6EMK4 673 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 NIPAL3Q6P499 406 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 PLBD1Q6P4A8 553 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 LNX2Q8N448 690 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 MMP28Q9H239 520 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 WDR70Q9NW82 654 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 ASB6Q9NWX5 421 aa17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 USP36Q9P275 1121 aaKnown RBP17.02■□□□□ 0.32
SEMA3B-209ENST00000456560 SLC35E2P0CK97 266 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 DRD5P21918 477 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 DAB2P98082 770 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 FAM131AQ6UXB0 335 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 Q7L0L9 218 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 MEPCEQ7L2J0 689 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 ZNF438Q7Z4V0 828 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 ARHGEF39Q8N4T4 335 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 FRMD1Q8N878 549 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 OR52L1Q8NGH7 329 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 HMGB4Q8WW32 186 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 AP3S1Q92572 193 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 PAQR5Q9NXK6 330 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 OR5K3A6NET4 321 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 SEC14L5O43304 696 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 HLA-DPB1P04440 258 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 CTBP2P56545 445 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 SCN1BQ07699 218 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 ZNF542PQ5EBM4 170 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 DDI2Q5TDH0 399 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 DIRAS2Q96HU8 199 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 GAS2L1Q99501 681 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 TIMP4Q99727 224 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 FAM60AQ9NP50 221 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 FBXL21Q9UKT6 434 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 TMEM5Q9Y2B1 443 aa17.01■□□□□ 0.31
SEMA3B-209ENST00000456560 SMIM30A4D0T7 59 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 FABP12A6NFH5 140 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 SHISA7A6NL88 538 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 RDH16O75452 317 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 RCBTB2O95199 551 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 CTSBP07858 339 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 CELP19835 753 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 S1PR1P21453 382 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 ATP6V1E1P36543 226 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 RPS5P46782 204 aaKnown RBP17■□□□□ 0.31
SEMA3B-209ENST00000456560 CCR5P51681 352 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 CAV3P56539 151 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 AMZ1Q400G9 498 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 RPL13AP3Q6NVV1 102 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 ZNF613Q6PF04 617 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 B3GLCTQ6Y288 498 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 ZNF761Q86XN6 746 aaPredicted RBP17■□□□□ 0.31
SEMA3B-209ENST00000456560 GDPD1Q8N9F7 314 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 OR52R1Q8NGF1 315 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 OR51G2Q8NGK0 314 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 DNAJA4Q8WW22 397 aaPredicted RBP17■□□□□ 0.31
SEMA3B-209ENST00000456560 KIAA1143Q96AT1 154 aaPredicted RBP17■□□□□ 0.31
SEMA3B-209ENST00000456560 BPIFA2Q96DR5 249 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 ZNF559Q9BR84 538 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 TMED9Q9BVK6 235 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 HCAR1Q9BXC0 346 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 SLC22A4Q9H015 551 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 EVA1AQ9H8M9 152 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 MED20Q9H944 212 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 TBC1D17Q9HA65 648 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 PLSCR3Q9NRY6 295 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 C14orf105Q9NVL8 296 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 GABRPO00591 440 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 POLR1CO15160 346 aaPredicted RBP17■□□□□ 0.31
SEMA3B-209ENST00000456560 PTP4A3O75365 173 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 GUSBP08236 651 aa17■□□□□ 0.31
SEMA3B-209ENST00000456560 TRAPPC2P0DI81 140 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms