RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ACBD4Q8NC06 268 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 GPR119Q8TDV5 335 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 SDCCAG3Q96C92 435 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 ADGRG7Q96K78 797 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 LAT2Q9GZY6 243 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 QRSL1Q9H0R6 528 aaKnown RBP12.79□□□□□ -0.36
HDAC4-205ENST00000454542 IKZF5Q9H5V7 419 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 CALHM2Q9HA72 323 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 A4GALTQ9NPC4 353 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 EXOSC3Q9NQT5 275 aaKnown RBP12.79□□□□□ -0.36
HDAC4-205ENST00000454542 CALML5Q9NZT1 146 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 CARD8Q9Y2G2 431 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 ZNF337Q9Y3M9 751 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 AP4B1Q9Y6B7 739 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 HEATR5AQ86XA9 2040 aa12.79□□□□□ -0.36
HDAC4-205ENST00000454542 H0Y3Z8 333 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 SLC22A2O15244 555 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 BCHEP06276 602 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 SNRPB2P08579 225 aaKnown RBP12.78□□□□□ -0.36
HDAC4-205ENST00000454542 NUDT7P0C024 238 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 ARAFP10398 606 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 NR2F1P10589 423 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 ADH6P28332 368 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 ADSLP30566 484 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-205ENST00000454542 CRATP43155 626 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 ZNF41P51814 821 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-205ENST00000454542 CRISP3P54108 245 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 TFF3Q07654 80 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 FOXF1Q12946 379 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 POMZP3Q6PJE2 187 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 EIF3MQ7L2H7 374 aaKnown RBP12.78□□□□□ -0.36
HDAC4-205ENST00000454542 DHDDSQ86SQ9 333 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 CMIPQ8IY22 773 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 NAXEQ8NCW5 288 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 OR5M1Q8NGP8 315 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 OR5W2Q8NH69 310 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 SLC38A5Q8WUX1 472 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 TMEM19Q96HH6 336 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 RNF145Q96MT1 663 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 BCL2L10Q9HD36 194 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 COQ3Q9NZJ6 369 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 NDUFAF1Q9Y375 327 aa12.78□□□□□ -0.36
HDAC4-205ENST00000454542 GPC6Q9Y625 555 aaPredicted RBP12.78□□□□□ -0.36
HDAC4-205ENST00000454542 CLCA1A8K7I4 914 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 H3BML4 177 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 FXYD1O00168 92 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 FBP2O00757 339 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 ANGPT2O15123 496 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 GMFGO60234 142 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 CSTAP01040 98 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 NID1P14543 1247 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 PRKCAP17252 672 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 GPX2P18283 190 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 EIF1P41567 113 aaKnown RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 SUCLG1P53597 346 aaKnown RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 CLDN20P56880 219 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 KLF10Q13118 480 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 CBFBQ13951 182 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 TOMM34Q15785 309 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 CTU2Q2VPK5 515 aaKnown RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 RUNDC3AQ59EK9 446 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 RNF220Q5VTB9 566 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 CCDC71Q8IV32 467 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 MEIOBQ8N635 442 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 C9orf106Q8NAJ2 232 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 TNIP2Q8NFZ5 429 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 LILRB4Q8NHJ6 448 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 WDR60Q8WVS4 1066 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 ST8SIA1Q92185 356 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 MRGPRX4Q96LA9 322 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 ANKRD27Q96NW4 1050 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 CGREF1Q99674 301 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 TREX2Q9BQ50 279 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 TMEM38AQ9H6F2 299 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 MTHFD2LQ9H903 347 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 DNAJB12Q9NXW2 375 aaKnown RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 ALKBH4Q9NXW9 302 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 CORO2BQ9UQ03 480 aa12.77□□□□□ -0.37
HDAC4-205ENST00000454542 SETXQ7Z333 2677 aaKnown RBP12.77□□□□□ -0.37
HDAC4-205ENST00000454542 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 CLDN24A6NM45 220 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 HSPB2A8KAH6 182 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 BBIP1A8MTZ0 92 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 H0YC42 278 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 GTPBP1O00178 669 aaKnown RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 FAAHO00519 579 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 ADAM11O75078 769 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 DBIP07108 87 aaKnown RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 THBS1P07996 1170 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 UBTFL6P0CB48 400 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 GRNP28799 593 aaKnown RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 LSP1P33241 339 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF136P52737 540 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 TPD52P55327 224 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 RAC1P63000 192 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 KCNJ10P78508 379 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 GNA13Q14344 377 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms