RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SMIM23A6NLE4 172 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ESPNB1AK53 854 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 E7EQL1 145 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ATP6V1G2-DDX39BF2Z307 99 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LINC01387J3KSC0 135 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 M0R1B8 84 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SCDO00767 359 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SMAD9O15198 467 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TLX2O43763 284 aaPredicted RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CYP7B1O75881 506 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NKX2-2O95096 273 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IFNA2P01563 188 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IGHV4-31P0DP07 118 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PYGBP11216 843 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HPGDP15428 266 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PRKCAP17252 672 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TAC1P20366 129 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ATP5F1P24539 256 aaPredicted RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SLC7A1P30825 629 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IDUAP35475 653 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SERPINB9P50453 376 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PRKAA2P54646 552 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MANFP55145 182 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CARD18P57730 90 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RAC1P63000 192 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TP53BP2Q13625 1128 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GGTLC2Q14390 218 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ETFDHQ16134 617 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CARTPTQ16568 116 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GALNTL6Q49A17 601 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SFRP5Q5T4F7 317 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LIPMQ5VYY2 423 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C11orf71Q6IPW1 123 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SLC22A25Q6T423 547 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CLEC2AQ6UVW9 174 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FRMD7Q6ZUT3 714 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 DTX2Q86UW9 622 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MMGT1Q8N4V1 131 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NUP43Q8NFH3 380 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR5D16Q8NGK9 328 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CPNE4Q96A23 557 aaPredicted RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PPCDCQ96CD2 204 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FAM120BQ96EK7 910 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 L3HYPDHQ96EM0 354 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C1orf159Q96HA4 380 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 REXO5Q96IC2 774 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C16orf45Q96MC5 204 aaPredicted RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR5B2Q96R09 309 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KCNK17Q96T54 332 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PSD2Q9BQI7 771 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C1orf50Q9BV19 199 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SERHL2Q9H4I8 314 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 EML4Q9HC35 981 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZCCHC3Q9NUD5 404 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SH3BP4Q9P0V3 963 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 POU2F3Q9UKI9 436 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SNX8Q9Y5X2 465 aa5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HEATR1Q9H583 2144 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TRRAPQ9Y4A5 3859 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 G3V2L1 256 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF195O14628 629 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SEC22BO75396 215 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SKAP2O75563 359 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RGS9O75916 674 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RSL1D1O76021 490 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SLU7O95391 586 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 F12P00748 615 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HMGN2P05204 90 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CHRNGP07510 517 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GSTA1P08263 222 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SNRPAP09012 282 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LINC00032P0C843 101 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MYL2P10916 166 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PRPS2P11908 318 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GGT1P19440 569 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 COX5AP20674 150 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IMPDH1P20839 514 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ELK4P28324 431 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NTF4P34130 210 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SOAT1P35610 550 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MAP3K8P41279 467 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR3A2P47893 321 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PSMD4P55036 377 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PKNOX1P55347 436 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PSPHP78330 225 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 POU6F2P78424 691 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ITGADQ13349 1161 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PTGR1Q14914 329 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 QPRTQ15274 297 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RNPS1Q15287 305 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GLYR1Q49A26 553 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 DCST2Q5T1A1 773 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PDZK1Q5T2W1 519 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CPTPQ5TA50 214 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LRIG3Q6UXM1 1119 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZYG11AQ6WRX3 759 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 Q6ZT83 130 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IKBIPQ70UQ0 350 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF572Q7Z3I7 529 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms