RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TESQ9UGI8 421 aaKnown RBP5.5□□□□□ -1.53
SDC4P-201ENST00000453285 IL17BQ9UHF5 180 aa5.5□□□□□ -1.53
SDC4P-201ENST00000453285 SLC35A3Q9Y2D2 325 aa5.5□□□□□ -1.53
SDC4P-201ENST00000453285 MRPS18BQ9Y676 258 aaKnown RBP5.5□□□□□ -1.53
SDC4P-201ENST00000453285 AKAP13Q12802 2813 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 SPTBN4Q9H254 2564 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 A0A0B4J2E0 115 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 LOC100130705A0A1B0GUX0 176 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 A0A1B0GWA3 101 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 A0A1B0GX12 115 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 B4DXG7 233 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 SCDO00767 359 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF264O43296 627 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 KLF4O43474 513 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 EIF4E2O60573 245 aaKnown RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 GFRA3O60609 400 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 OR2J2O76002 312 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 CLIC3O95833 236 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 RPSAP08865 295 aaKnown RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 UBTFL6P0CB48 400 aaPredicted RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 UBL4AP11441 157 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 MYF6P23409 242 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 IGFBP5P24593 272 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 EPHA2P29317 976 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 IL12BP29460 328 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 RBMS1P29558 406 aaKnown RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 EVI2BP34910 448 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 KRT20P35900 424 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 OMPP47874 163 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 GSSP48637 474 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 CLK3P49761 638 aaKnown RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 RAD23AP54725 363 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 NRG3P56975 720 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 MLF1P58340 268 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF117Q03924 483 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 FOXD4Q12950 439 aaPredicted RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 NPRL3Q12980 569 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 EFR3AQ14156 821 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 RTP5Q14D33 572 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 PDK3Q15120 406 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TGIF1Q15583 401 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 NTRK2Q16620 822 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 RSPO4Q2I0M5 234 aaPredicted RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 RFX4Q33E94 735 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF791Q3KP31 576 aaPredicted RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 FGD3Q5JSP0 725 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 KLHL17Q6TDP4 642 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 CD300LDQ6UXZ3 194 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 GALNT5Q7Z7M9 940 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 MRGPREQ86SM8 312 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 RANBP3LQ86VV4 465 aaPredicted RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 APLFQ8IW19 511 aaPredicted RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF440Q8IYI8 595 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TAGAPQ8N103 731 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 LINC00471Q8N535 108 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ATG16L2Q8NAA4 619 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 GATSQ8NAP1 163 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF527Q8NB42 609 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 AQP11Q8NBQ7 271 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TOR1AIP2Q8NFQ8 470 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 OR4K5Q8NGD3 323 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 PHOSPHO1Q8TCT1 267 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TMEM255BQ8WV15 326 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 CYGBQ8WWM9 190 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ACOT11Q8WXI4 607 aaPredicted RBP5.49□□□□□ -1.53
SDC4P-201ENST00000453285 PSMF1Q92530 271 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TTC9Q92623 222 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 SLC38A4Q969I6 547 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 CNBD2Q96M20 576 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 PITX2Q99697 317 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 GPA33Q99795 319 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF426Q9BUY5 554 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 DGCR6LQ9BY27 220 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 GABARAPL3Q9BY60 117 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TRIM2Q9C040 744 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 GRIP2Q9C0E4 1043 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 CDCP1Q9H5V8 836 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TMEM27Q9HBJ8 222 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 KRT84Q9NSB2 600 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 FBXL4Q9UKA2 621 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 TMCC3Q9ULS5 477 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 SLC7A7Q9UM01 511 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ICAM5Q9UMF0 924 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 MGAT4BQ9UQ53 548 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 CARD8Q9Y2G2 431 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 POFUT2Q9Y2G5 429 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 HRH3Q9Y5N1 445 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF407Q9C0G0 2248 aa5.49□□□□□ -1.53
SDC4P-201ENST00000453285 H3BNH8 94 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 GTPBP1O00178 669 aaKnown RBP5.48□□□□□ -1.53
SDC4P-201ENST00000453285 NDUFB5O43674 189 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 CHP2O43745 196 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 PIP5K1CO60331 668 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 OR10H3O60404 316 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 ITGA10O75578 1167 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 OR6B1O95007 311 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 WISP1O95388 367 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 ANGPTL1O95841 491 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 ADAP00813 363 aa5.48□□□□□ -1.53
SDC4P-201ENST00000453285 SERPINA7P05543 415 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms