RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 POC1BQ8TC44 478 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 ADGRG7Q96K78 797 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 PAIP2Q9BPZ3 127 aaKnown RBP11.55□□□□□ -0.56
CHD3-206ENST00000452447 KLHL4Q9C0H6 718 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 FANCFQ9NPI8 374 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 TIGARQ9NQ88 270 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 C6orf203Q9P0P8 240 aaPredicted RBP11.55□□□□□ -0.56
CHD3-206ENST00000452447 RAB21Q9UL25 225 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 ICAM5Q9UMF0 924 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 ACTL7BQ9Y614 415 aa11.55□□□□□ -0.56
CHD3-206ENST00000452447 GPC6Q9Y625 555 aaPredicted RBP11.55□□□□□ -0.56
CHD3-206ENST00000452447 NIPBLQ6KC79 2804 aaeCLIP11.55□□□□□ -0.563e-8■■■■□ 24.2
CHD3-206ENST00000452447 A0A0J9YW62 118 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 RNF103-CHMP3A0A140T963 221 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 GJE1A6NN92 205 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 AK1P00568 194 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 PABPC4LP0CB38 370 aaKnown RBP11.54□□□□□ -0.56
CHD3-206ENST00000452447 DHRS4L1P0CG22 281 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 BGNP21810 368 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ELK4P28324 431 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 SUMO3P55854 103 aaPredicted RBP11.54□□□□□ -0.56
CHD3-206ENST00000452447 RPS26P62854 115 aaKnown RBP11.54□□□□□ -0.56
CHD3-206ENST00000452447 FOXF1Q12946 379 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 GPR68Q15743 365 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHD3-206ENST00000452447 STK32CQ86UX6 486 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 TMCO5AQ8N6Q1 288 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 OR8J2Q8NGG1 315 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 RFWD2Q8NHY2 731 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 FBXO27Q8NI29 283 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 OSTF1Q92882 214 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ZBTB9Q96C00 473 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ZC3HAV1LQ96H79 300 aaKnown RBP11.54□□□□□ -0.56
CHD3-206ENST00000452447 KLHL15Q96M94 604 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 SDF2Q99470 211 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 SORT1Q99523 831 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 KLHDC3Q9BQ90 382 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 NUF2Q9BZD4 464 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 C20orf27Q9GZN8 174 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 PLSCR4Q9NRQ2 329 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 EXD2Q9NVH0 621 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ZNF195O14628 629 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ZNF264O43296 627 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 SS18L1O75177 396 aaPredicted RBP11.54□□□□□ -0.56
CHD3-206ENST00000452447 STX11O75558 287 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 CPSF4O95639 269 aaKnown RBP11.54□□□□□ -0.56
CHD3-206ENST00000452447 UBL4AP11441 157 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 LBPP18428 481 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 KLK2P20151 261 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 CCR4P51679 360 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ANXA8L1Q5VT79 327 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 HHATQ5VTY9 493 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ZNF550Q7Z398 422 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 C16orf62Q7Z3J2 963 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ANKRD46Q86W74 232 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 CLEC4FQ8N1N0 589 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 ATP6V1C2Q8NEY4 427 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 TOR1AIP2Q8NFQ8 470 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 PIK3IP1Q96FE7 263 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 SLC35G5Q96KT7 338 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 NMUR2Q9GZQ4 415 aa11.54□□□□□ -0.56
CHD3-206ENST00000452447 PRSS51A0A1B0GVH4 220 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 A0A1W2PPR1 153 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 NPIPB9F8W1W9 429 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 OIP5O43482 229 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 EIF4E2O60573 245 aaKnown RBP11.53□□□□□ -0.56
CHD3-206ENST00000452447 CYP7B1O75881 506 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 AGR2O95994 175 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 PRKCAP17252 672 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 IL11P20809 199 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 CRYGSP22914 178 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 CCKARP32238 428 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 CBFBQ13951 182 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 MPP2Q14168 576 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 TOMM34Q15785 309 aaPredicted RBP11.53□□□□□ -0.56
CHD3-206ENST00000452447 DPY19L1Q2PZI1 675 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 NDUFAF6Q330K2 333 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 ARHGAP11BQ3KRB8 267 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 TMEM176BQ3YBM2 270 aaPredicted RBP11.53□□□□□ -0.56
CHD3-206ENST00000452447 TNFAIP8L3Q5GJ75 292 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 TMEM201Q5SNT2 666 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 PDZK1Q5T2W1 519 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 ANKRD34AQ69YU3 496 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 BEND4Q6ZU67 534 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 LRRC34Q8IZ02 419 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 OR5W2Q8NH69 310 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 GPR119Q8TDV5 335 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 ROBO4Q8WZ75 1007 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 CPNE4Q96A23 557 aaPredicted RBP11.53□□□□□ -0.56
CHD3-206ENST00000452447 ARL8AQ96BM9 186 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 TESCQ96BS2 214 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 MRGPRX4Q96LA9 322 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 SERHL2Q9H4I8 314 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 HAO1Q9UJM8 370 aa11.53□□□□□ -0.56
CHD3-206ENST00000452447 SERINC4A6NH21 518 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 DEFB108AA8MXU0 73 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 PPP3CBP16298 524 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 UQCRC2P22695 453 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms