RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CCNJQ5T5M9 372 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 KANK2Q63ZY3 851 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 HEPHL1Q6MZM0 1159 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 LRIG3Q6UXM1 1119 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 DNAJC14Q6Y2X3 702 aaPredicted RBP9.69□□□□□ -0.86
USP1-204ENST00000452143 Q6ZSR9 355 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 SSX8Q7RTT4 187 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 SLC43A2Q8N370 569 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 BANPQ8N9N5 519 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 CCDC63Q8NA47 563 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 OR2T11Q8NH01 316 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 HSD17B8Q92506 261 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 KISS1RQ969F8 398 aaPredicted RBP9.69□□□□□ -0.86
USP1-204ENST00000452143 FAM120BQ96EK7 910 aaKnown RBP9.69□□□□□ -0.86
USP1-204ENST00000452143 HOXD1Q9GZZ0 328 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 PIGUQ9H490 435 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 L2HGDHQ9H9P8 463 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 FBXO34Q9NWN3 711 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 PTGDR2Q9Y5Y4 395 aa9.69□□□□□ -0.86
USP1-204ENST00000452143 A0A1W2PPM1 405 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 COPEO14579 308 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 CLOCKO15516 846 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 AKAP10O43572 662 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 PRKD3O94806 890 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 NUDT14O95848 222 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 HMGN2P05204 90 aaKnown RBP9.68□□□□□ -0.86
USP1-204ENST00000452143 FESP07332 822 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 KRT16P08779 473 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 MAPK1P28482 360 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 SHC1P29353 583 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 SFTPDP35247 375 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 IDUAP35475 653 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 P2RX1P51575 399 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 SELENBP1Q13228 472 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 ITGADQ13349 1161 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 LASP1Q14847 261 aaKnown RBP9.68□□□□□ -0.86
USP1-204ENST00000452143 TAB1Q15750 504 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 ZNF672Q499Z4 452 aaPredicted RBP9.68□□□□□ -0.86
USP1-204ENST00000452143 KLHL26Q53HC5 615 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 CDC73Q6P1J9 531 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 FCRLAQ7L513 359 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 TUSC5Q8IXB3 177 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 NATD1Q8N6N6 113 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 CEP112Q8N8E3 955 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 OR56A1Q8NGH5 318 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 LILRB1Q8NHL6 650 aaPredicted RBP9.68□□□□□ -0.86
USP1-204ENST00000452143 CLHC1Q8NHS4 586 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 PSMA8Q8TAA3 256 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 RAB3IL1Q8TBN0 382 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 PHOSPHO1Q8TCT1 267 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 ZFP90Q8TF47 636 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 ROBO4Q8WZ75 1007 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
USP1-204ENST00000452143 C16orf58Q96GQ5 468 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 MRGPRX4Q96LA9 322 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 SRXN1Q9BYN0 137 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 COQ10BQ9H8M1 238 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 BCO1Q9HAY6 547 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 SIRT3Q9NTG7 399 aaPredicted RBP9.68□□□□□ -0.86
USP1-204ENST00000452143 FAIMQ9NVQ4 179 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 KLHL9Q9P2J3 617 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 ICAM5Q9UMF0 924 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 DNAJC15Q9Y5T4 150 aa9.68□□□□□ -0.86
USP1-204ENST00000452143 NUP214P35658 2090 aaPredicted RBP9.68□□□□□ -0.86
USP1-204ENST00000452143 A0A1W2PP18 115 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 ETV2O00321 342 aaPredicted RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 ZNF195O14628 629 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 SCAMP2O15127 329 aaKnown RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 NTN1O95631 604 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 TP53P04637 393 aaPredicted RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 YES1P07947 543 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 SOD3P08294 240 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 FAM153BP0C7A2 387 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 BCKDHAP12694 445 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 PRKCAP17252 672 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 SLC7A1P30825 629 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 RAC3P60763 192 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 PCLAFQ15004 111 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 FAM153CQ494X1 144 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 GALNTL6Q49A17 601 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 SLC25A53Q5H9E4 307 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 DCST2Q5T1A1 773 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 C3orf33Q6P1S2 294 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 CBLN3Q6UW01 205 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 SEZ6L2Q6UXD5 910 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 Q6ZT83 130 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 NUFIP2Q7Z417 695 aaKnown RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 FBXO27Q8NI29 283 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 PIWIL2Q8TC59 973 aaKnown RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 SMAP2Q8WU79 429 aaPredicted RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 CDS1Q92903 461 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 OTUB1Q96FW1 271 aaPredicted RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 CHMP6Q96FZ7 201 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 KLHDC3Q9BQ90 382 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 ACTRT3Q9BYD9 372 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 GRIP2Q9C0E4 1043 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 TUBB1Q9H4B7 451 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 BARX1Q9HBU1 254 aaPredicted RBP9.67□□□□□ -0.86
USP1-204ENST00000452143 ATAD3AQ9NVI7 634 aa9.67□□□□□ -0.86
USP1-204ENST00000452143 BAIAP2L1Q9UHR4 511 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms