RNA–Protein interactions for RNA: ENST00000451240.1

AC005550.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC005550.3, Length 3,743 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005550.3-201ENST00000451240 RASD1Q9Y272 281 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 GSTK1Q9Y2Q3 226 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 YBX2Q9Y2T7 364 aaKnown RBP3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 KCNIP3Q9Y2W7 256 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 STON1Q9Y6Q2 735 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 POLR2AP24928 1970 aaKnown RBP3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 ASTN1O14525 1302 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 IGKV6-21A0A0C4DH24 114 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 SMIM23A6NLE4 172 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 H3BMQ9 156 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 SLC37A4O43826 429 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 KCNJ13O60928 360 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 CSDE1O75534 798 aaKnown RBP3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 LAP3P28838 519 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 ARR3P36575 388 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 CDKN1AP38936 164 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 KHKP50053 298 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 ARHGDIBP52566 201 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 CLDN17P56750 224 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 SIM1P81133 766 aaPredicted RBP3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 FASTKD3Q14CZ7 662 aaKnown RBP3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 VPS26BQ4G0F5 336 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 EMBQ6PCB8 327 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 WDR53Q7Z5U6 358 aaPredicted RBP3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 C5orf24Q7Z6I8 188 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 ZNF683Q8IZ20 524 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 NPEPL1Q8NDH3 523 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 M1APQ8TC57 530 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 TMED6Q8WW62 240 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 C14orf79Q96F83 325 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 PCDHB18PQ96TA0 734 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 ALG8Q9BVK2 526 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 DGCR6LQ9BY27 220 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 RAB34Q9BZG1 259 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 LIME1Q9H400 295 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 PARVGQ9HBI0 331 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 PLGRKTQ9HBL7 147 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 ESM1Q9NQ30 184 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 RBAKQ9NYW8 714 aaPredicted RBP3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 LHX3Q9UBR4 397 aa3.4□□□□□ -1.87
AC005550.3-201ENST00000451240 A0A1W2PR77 199 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 MYMKA6NI61 221 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 WASHC1A8K0Z3 465 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 ZNF487B1APH4 448 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 TCP10L2B9ZVM9 353 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 NEDD8-MDP1E9PL57 170 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 F8VZ95 297 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 KPNA3O00505 521 aaPredicted RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 TRDMT1O14717 391 aaKnown RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 LATO43561 262 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 SHOX2O60902 331 aaPredicted RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 AP2A1O95782 977 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 RPL34P49207 117 aaKnown RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 TNFSF10P50591 281 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 ARG2P78540 354 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 PLOD1Q02809 727 aaPredicted RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 RBBP4Q09028 425 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 GPR17Q13304 367 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 FHL3Q13643 280 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 ITGA9Q13797 1035 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 KLF5Q13887 457 aaPredicted RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 MAD2L1BPQ15013 274 aaPredicted RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 NRN1LQ496H8 165 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 ADGRE4PQ86SQ3 457 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 NLRX1Q86UT6 975 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 ADIPOR2Q86V24 386 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 CRLF3Q8IUI8 442 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 FAM58AQ8N1B3 248 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 TBC1D19Q8N5T2 526 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 B3GNT7Q8NFL0 401 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 OR51E1Q8TCB6 317 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 MRAPQ8TCY5 172 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 OSTF1Q92882 214 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 SLC38A4Q969I6 547 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 TMEM159Q96B96 161 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 HAVCR1Q96D42 359 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 CTRCQ99895 268 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 SEC61A2Q9H9S3 476 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 PLEKHA3Q9HB20 300 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 CHST11Q9NPF2 352 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 OR6C2Q9NZP2 312 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 ABI3Q9P2A4 366 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 CABIN1Q9Y6J0 2220 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 EFCAB9A8MZ26 197 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 FAM189A1O60320 539 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 FCN3O75636 299 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 SRP72O76094 671 aaKnown RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 NXPH3O95157 252 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 CNIH1O95406 144 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 POP4O95707 220 aaKnown RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 NR2C1P13056 603 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 ACO1P21399 889 aaKnown RBP3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 TNFSF8P32971 234 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 PLA2G16P53816 162 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 DSTNP60981 165 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 PAFAH1B2P68402 229 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 STX4Q12846 297 aa3.39□□□□□ -1.87
AC005550.3-201ENST00000451240 DNASE1L3Q13609 305 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms