RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LZICQ8WZA0 190 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 RIT1Q92963 219 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 COL26A1Q96A83 441 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 PTDSS2Q9BVG9 487 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 NXF5Q9H1B4 397 aaKnown RBP6.05□□□□□ -1.44
USP46-202ENST00000451218 MIR1-1HGQ9H1L0 117 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 ADAP2Q9NPF8 381 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 TOR4AQ9NXH8 423 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 CHRNA9Q9UGM1 479 aa6.05□□□□□ -1.44
USP46-202ENST00000451218 KALRNO60229 2985 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SH3D21A4FU49 640 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 URADA6NGE7 173 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 PTGES3LE9PB15 166 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 STX11O75558 287 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SERPINB7O75635 380 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 RNH1P13489 461 aaKnown RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 GNSP15586 552 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 NR4A1P22736 598 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SIGLEC14Q08ET2 396 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 TARDBPQ13148 414 aaKnown RBP eCLIP6.04□□□□□ -1.44
USP46-202ENST00000451218 PLAG1Q6DJT9 500 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 RHBDD2Q6NTF9 364 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 PWWP2BQ6NUJ5 590 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 CD200R1LQ6Q8B3 271 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 NRMQ8IXM6 262 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SLC9A6Q92581 669 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 RNF31Q96EP0 1072 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 MVB12AQ96EY5 273 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SMAD5Q99717 465 aaKnown RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 ZBTB20Q9HC78 741 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 ANKHQ9HCJ1 492 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 FGF20Q9NP95 211 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 FBXL4Q9UKA2 621 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 A0A1W2PQ72 361 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 TERTO14746 1132 aaKnown RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 FADS1O60427 444 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 NPIPB7O75200 414 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 GPX5O75715 221 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 GPR4P46093 362 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 MLLT1Q03111 559 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 ST3GAL4Q11206 333 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 COX10Q12887 443 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SLC23A3Q6PIS1 610 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 ATG4DQ86TL0 474 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 SAMD14Q8IZD0 417 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 CENPSQ8N2Z9 138 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SETD9Q8NE22 299 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 TMEM163Q8TC26 289 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SLC2A12Q8TD20 617 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 IPCEF1Q8WWN9 437 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 C3orf49Q96BT1 292 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 CENPOQ9BU64 300 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 TEX12Q9BXU0 123 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 NMNAT2Q9BZQ4 307 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 ADAM19Q9H013 955 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 IFT52Q9Y366 437 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SIRT4Q9Y6E7 314 aaPredicted RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 CABIN1Q9Y6J0 2220 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 ZC3H12DA2A288 527 aaKnown RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 DBIP07108 87 aaKnown RBP6.04□□□□□ -1.44
USP46-202ENST00000451218 CKMT1AP12532 417 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 ARL4DP49703 201 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 TMEM71Q6P5X7 295 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 KMT5CQ86Y97 462 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 OR4D9Q8NGE8 314 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SLC38A4Q969I6 547 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SLC38A3Q99624 504 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 SLC26A1Q9H2B4 701 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 DNAJC27Q9NZQ0 273 aa6.04□□□□□ -1.44
USP46-202ENST00000451218 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.03□□□□□ -1.44
USP46-202ENST00000451218 TMEM247A6NEH6 219 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 FRG2CA6NGY1 282 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 SC5DO75845 299 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 IL33O95760 270 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 IGF2P01344 180 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 NOS3P29474 1203 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 PCYT1AP49585 367 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 GPR68Q15743 365 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 C1orf210Q8IVY1 113 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 LRRC17Q8N6Y2 441 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 PLPP5Q8NEB5 264 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 HGDQ93099 445 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 MMABQ96EY8 250 aaPredicted RBP6.03□□□□□ -1.44
USP46-202ENST00000451218 VMP1Q96GC9 406 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 MCHR1Q99705 422 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 APOL4Q9BPW4 351 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 ADNPQ9H2P0 1102 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 PDE7BQ9NP56 450 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 HINT3Q9NQE9 182 aaKnown RBP6.03□□□□□ -1.44
USP46-202ENST00000451218 OCIAD1Q9NX40 245 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 GPR52Q9Y2T5 361 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 DSPP15924 2871 aaKnown RBP6.03□□□□□ -1.44
USP46-202ENST00000451218 A0A087WV48 116 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 A0A1B0GWA3 101 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 DUXAA6NLW8 204 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 LRRN3E7EW58 273 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 RGS10O43665 173 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 CHP2O43745 196 aa6.03□□□□□ -1.44
USP46-202ENST00000451218 NOL3O60936 208 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms