RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 PIGMQ9H3S5 423 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 GRXCR1A8MXD5 290 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 H7BY64 318 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 IL1RNP18510 177 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 GKP32189 559 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 RNF144AP50876 292 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-202ENST00000449880 CLRN1P58418 232 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ACTBL2Q562R1 376 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF585AQ6P3V2 769 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ANKRD53Q8N9V6 530 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 OR10K1Q8NGX5 313 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 NECTIN4Q96NY8 510 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 PRAP1Q96NZ9 151 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 GSX2Q9BZM3 304 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 ASGR2P07307 311 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 SGPP2Q8IWX5 399 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 PHYHIPQ92561 330 aa13.1□□□□□ -0.31
ITGB4-202ENST00000449880 HOXB13Q92826 284 aaPredicted RBP13.1□□□□□ -0.31
ITGB4-202ENST00000449880 TRDV1A0A1B0GX56 115 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 RFXAPO00287 272 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 CSTAP01040 98 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 TCRBP04435 133 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF704Q6ZNC4 412 aaPredicted RBP13.09□□□□□ -0.31
ITGB4-202ENST00000449880 ZER1Q7Z7L7 766 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 GALNT10Q86SR1 603 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 KLHL15Q96M94 604 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 COL24A1Q17RW2 1714 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 TRA2BP62995 288 aaKnown RBP13.09□□□□□ -0.31
ITGB4-202ENST00000449880 FCN2Q15485 313 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 UNQ6126/PRO20091Q6UXV3 157 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 PDZD3Q86UT5 571 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 RNF141Q8WVD5 230 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 MICU1Q9BPX6 476 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 CENPOQ9BU64 300 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 TSPAN10Q9H1Z9 355 aaPredicted RBP13.09□□□□□ -0.31
ITGB4-202ENST00000449880 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 KAT6AQ92794 2004 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 NPIPA2E9PIF3 369 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 NPIPA3F8WFD2 350 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 S100A8P05109 93 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 DDCP20711 480 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 MGAT3Q09327 533 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 BCL2A1Q16548 175 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 PGGHGQ32M88 737 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 C1orf94Q6P1W5 598 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 TMPPEQ6ZT21 453 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 SPATA6Q9NWH7 488 aaPredicted RBP13.09□□□□□ -0.31
ITGB4-202ENST00000449880 CAMK2AQ9UQM7 478 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 EFCAB7A8K855 629 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 E9PI62 339 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 IMPA2O14732 288 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 GPR39O43194 453 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 BPNT1O95861 308 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 IDUAP35475 653 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 LMAN2Q12907 356 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 ELAVL3Q14576 367 aaKnown RBP13.09□□□□□ -0.31
ITGB4-202ENST00000449880 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 GPR34Q9UPC5 381 aa13.09□□□□□ -0.31
ITGB4-202ENST00000449880 A0A1W2PS29 197 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 TTLL8A6PVC2 850 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 PTHP01270 115 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 AFF3P51826 1226 aaKnown RBP13.08□□□□□ -0.31
ITGB4-202ENST00000449880 RPS15AP62244 130 aaKnown RBP13.08□□□□□ -0.31
ITGB4-202ENST00000449880 CLPPQ16740 277 aaPredicted RBP13.08□□□□□ -0.31
ITGB4-202ENST00000449880 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 TRNP1Q6NT89 227 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 LPCAT3Q6P1A2 487 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 TMEM107Q6UX40 140 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 RNF128Q8TEB7 428 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 ACOT11Q8WXI4 607 aaPredicted RBP13.08□□□□□ -0.31
ITGB4-202ENST00000449880 UBXN10Q96LJ8 280 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 ZNF583Q96ND8 569 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 TMPRSS11EQ9UL52 423 aa13.08□□□□□ -0.31
ITGB4-202ENST00000449880 AK6Q9Y3D8 172 aaKnown RBP13.08□□□□□ -0.31
ITGB4-202ENST00000449880 PGGT1BP53609 377 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 RPL22L1Q6P5R6 122 aaKnown RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ZNF534Q76KX8 674 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 FNDC9Q8TBE3 224 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ACPTQ9BZG2 426 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 HOXD1Q9GZZ0 328 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 PLCXD1Q9NUJ7 323 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 KIF25Q9UIL4 384 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ADAM23O75077 832 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 FBLP22087 321 aaKnown RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 GABRA3P34903 492 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 SNRPGP62308 76 aaKnown RBP13.08□□□□□ -0.32
ITGB4-202ENST00000449880 APOOLQ6UXV4 268 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 UBTD2Q8WUN7 234 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 MS4A4EQ96PG1 132 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 CSNK1G1Q9HCP0 422 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 RCE1Q9Y256 329 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 ETV7Q9Y603 341 aa13.08□□□□□ -0.32
ITGB4-202ENST00000449880 MYH9P35579 1960 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms