RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TNFRSF17Q02223 184 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR4F3Q6IEY1 312 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PDSS2Q86YH6 399 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZCCHC7Q8N3Z6 543 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 CAVIN3Q969G5 261 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM234AQ9H0X4 552 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC6A15Q9H2J7 730 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 DMRT3Q9NQL9 472 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 WDR37Q9Y2I8 494 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ANKRD30BLA7E2S9 258 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 FZD6O60353 706 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 REEP5Q00765 189 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF844Q08AG5 666 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PROX2Q3B8N5 592 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ATP1A1-AS1Q5TC04 95 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 FDCSPQ8NFU4 85 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 TSLPQ969D9 159 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 EID2BQ96D98 161 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 MTERF3Q96E29 417 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 EHD1Q9H4M9 534 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 CRLF2Q9HC73 371 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 CTPS2Q9NRF8 586 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 CKLFQ9UBR5 152 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ADAM29Q9UKF5 820 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 IL1AP01583 271 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 RAB40ALP0C0E4 278 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF20P17024 532 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 TACR1P25103 407 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 STAT5AP42229 794 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC15A1P46059 708 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SPIBQ01892 262 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 TUBA3CQ13748 450 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF283Q8N7M2 679 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PTPMT1Q8WUK0 201 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 LMF1Q96S06 567 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 CDRT15Q96T59 188 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SERHL2Q9H4I8 314 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PLLPQ9Y342 182 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 USF3Q68DE3 2245 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 KLF11O14901 512 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 BCHEP06276 602 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 FCGR1AP12314 374 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 HOXD11P31277 338 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 CCNIQ14094 377 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ANKRD26P1Q6NSI1 321 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ARSKQ6UWY0 536 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 BEND4Q6ZU67 534 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPALPP1Q8IXQ4 340 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 LRRC20Q8TCA0 184 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 C19orf43Q9BQ61 176 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 GNB4Q9HAV0 340 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ELOVL3Q9HB03 270 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 LYRM4Q9HD34 91 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 IL20RAQ9UHF4 553 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZFYVE26Q68DK2 2539 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC22A31A6NKX4 558 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC43A1O75387 559 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 ETS2P15036 469 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 UQCRC2P22695 453 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 SERPINF1P36955 418 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 MFAP5Q13361 173 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 COL19A1Q14993 1142 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 TYW3Q6IPR3 259 aaKnown RBP5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 TRPM8Q7Z2W7 1104 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLITRK4Q8IW52 837 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 C1orf216Q8TAB5 229 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 DUSP19Q8WTR2 217 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 VWCEQ96DN2 955 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 RNF145Q96MT1 663 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 DLL3Q9NYJ7 618 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZMAT5Q9UDW3 170 aaKnown RBP5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC35A3Q9Y2D2 325 aa5.21□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR2J2O76002 312 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ALDOBP05062 364 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 UBL4AP11441 157 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC26A5P58743 744 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 EXOSC7Q15024 291 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 TYSND1Q2T9J0 566 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 ADGRD1Q6QNK2 874 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 TMEM64Q6YI46 380 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 GALNT5Q7Z7M9 940 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 BEST3Q8N1M1 668 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR52B6Q8NGF0 335 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR13J1Q8NGT2 312 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLCO2A1Q92959 643 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 EME1Q96AY2 570 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 WDR54Q9H977 334 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SMURF2Q9HAU4 748 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 LANCL2Q9NS86 450 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SCN3BQ9NY72 215 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 FOXD3Q9UJU5 478 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 NUP50Q9UKX7 468 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SAMD4AQ9UPU9 718 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC6A5Q9Y345 797 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 TEX264Q9Y6I9 313 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 A0A1W2PQM1 296 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 EIF1BO60739 113 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 FGF5P12034 268 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 CDKN2DP55273 166 aa5.21□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR6K6Q8NGW6 343 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms