RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 EIF1P41567 113 aaKnown RBP12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 STARP49675 285 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 MTPNP58546 118 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 B3GALT5-AS1P59052 145 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 CDK6Q00534 326 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 CYP51A1Q16850 503 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 PLPPR5Q32ZL2 321 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 LIN52Q52LA3 116 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 RPS26P11Q5JNZ5 115 aaPredicted RBP12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 DCST1Q5T197 706 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 PRAMEF8Q5VWM4 474 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 PRAMEF7Q5VXH5 474 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 REEP3Q6NUK4 255 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 B3GNT6Q6ZMB0 384 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 KRT73Q86Y46 540 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 POU5F2Q8N7G0 328 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 NFKBIDQ8NI38 313 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 PHF10Q8WUB8 498 aaKnown RBP12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 SMPDL3BQ92485 455 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 RND1Q92730 232 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 LRRC58Q96CX6 371 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 CMTM5Q96DZ9 223 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 WDYHV1Q96HA8 205 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 CCDC106Q9BWC9 280 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 IKZF5Q9H5V7 419 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 BCL2L10Q9HD36 194 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 COQ3Q9NZJ6 369 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 IFT52Q9Y366 437 aa12.69□□□□□ -0.38
GTF3C3-206ENST00000448539 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 DCTN3O75935 186 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ARAFP10398 606 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 COX4I1P13073 169 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 NID1P14543 1247 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 RPS4Y1P22090 263 aaKnown RBP12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ME2P23368 584 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 PGM1P36871 562 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 SLC6A8P48029 635 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 LHX2P50458 406 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 EEFSECP57772 596 aaKnown RBP12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 SKP2Q13309 424 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 SCARB2Q14108 478 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 MAPK11Q15759 364 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 BCL2A1Q16548 175 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 NANOGP8Q6NSW7 305 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 MRGPRGQ86SM5 289 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 UBQLNLQ8IYU4 475 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 GTPBP8Q8N3Z3 284 aaPredicted RBP12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 C11orf65Q8NCR3 313 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 OR8J3Q8NGG0 315 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 OR10Q1Q8NGQ4 319 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF563Q8TA94 476 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 GPR119Q8TDV5 335 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 TMEM234Q8WY98 164 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 RCN3Q96D15 328 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ARSGQ96EG1 525 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 RNF145Q96MT1 663 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 DMRTA2Q96SC8 542 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 CCT8L2Q96SF2 557 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF607Q96SK3 696 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ECSITQ9BQ95 431 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 SPATA5L1Q9BVQ7 753 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 TRIM8Q9BZR9 551 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 TMEM38AQ9H6F2 299 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 NANOGQ9H9S0 305 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ANGPT4Q9Y264 503 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF337Q9Y3M9 751 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 GPC6Q9Y625 555 aaPredicted RBP12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 AP4B1Q9Y6B7 739 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 LRRK2Q5S007 2527 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 GTF3C1Q12789 2109 aa12.68□□□□□ -0.38
GTF3C3-206ENST00000448539 DSPPQ9NZW4 1301 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 C7orf72A4D263 438 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 CLDN24A6NM45 220 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 SHISA8B8ZZ34 492 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 AIM2O14862 343 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 SEC14L5O43304 696 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 PGM3O95394 542 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 THBS1P07996 1170 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 LINGO3P0C6S8 592 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 UQCRBP14927 111 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF708P17019 499 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 RYKP34925 604 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 RBBP4Q09028 425 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 PMPCAQ10713 525 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 FOXF1Q12946 379 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ART3Q13508 389 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 QPRTQ15274 297 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ZSWIM7Q19AV6 140 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ACSF3Q4G176 576 aaPredicted RBP12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF311Q5JNZ3 666 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 MRPL2Q5T653 305 aaKnown RBP12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 GKAP1Q5VSY0 366 aaPredicted RBP12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 NCCRP1Q6ZVX7 275 aaPredicted RBP12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 PIGWQ7Z7B1 504 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 VRK2Q86Y07 508 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms