RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TMPRSS4Q9NRS4 437 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 ASB6Q9NWX5 421 aa10.04□□□□□ -0.8
LINC00342-202ENST00000448494 A6NLC8 198 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 GABRPO00591 440 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 EFSO43281 561 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 NTSR2O95665 410 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 CTSHP09668 335 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 HLA-DPA1P20036 260 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 TACR3P29371 465 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 GALNSP34059 522 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 THBS2P35442 1172 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 AHRP35869 848 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 MC3RP41968 323 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 LUMP51884 338 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ART1P52961 327 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DGCR2P98153 550 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DDX39BQ13838 428 aaKnown RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 UGCGQ16739 394 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 NDUFA9Q16795 377 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 RFTN2Q52LD8 501 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 XKR4Q5GH76 650 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 HIST2H3PS2Q5TEC6 136 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF385CQ66K41 422 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 JMJD6Q6NYC1 403 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DPPA4Q7L190 304 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF551Q7Z340 670 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 GID4Q8IVV7 300 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 SPNS2Q8IVW8 549 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 RYBPQ8N488 228 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DNAAF1Q8NEP3 725 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 OR8J1Q8NGP2 316 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 OR51Q1Q8NH59 317 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 HAVCR2Q8TDQ0 301 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 FAM151AQ8WW52 585 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 TPD52L3Q96J77 140 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM106CQ9BVX2 250 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DDA1Q9BW61 102 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 SMOC1Q9H4F8 434 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 FBXO44Q9H4M3 255 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 FKRPQ9H9S5 495 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 KRCC1Q9NPI7 259 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ASIC5Q9NY37 505 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 TESQ9UGI8 421 aaKnown RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 UTRNP46939 3433 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ELOA3CA0A087WX78 387 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 OR2AT4A6NND4 320 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 B4E171 279 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ANHXE9PGG2 379 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 NPIPB8E9PQR5 432 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 KLK8O60259 260 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 OR2F2O95006 317 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 KCNK5O95279 499 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 THBS4P35443 961 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 H2BFSP57053 126 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 HTRA3P83110 453 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 SRSF3P84103 164 aaKnown RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 SPIBQ01892 262 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 PJVKQ0ZLH3 352 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 OR2F1Q13607 317 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 IL10RAQ13651 578 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 KIAA0141Q14154 515 aaPredicted RBP10.03□□□□□ -0.8
LINC00342-202ENST00000448494 HMGN3Q15651 99 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 GFOD2Q3B7J2 385 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 SCGB2B2Q4G0G5 96 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DOK6Q6PKX4 331 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 LRRTM1Q86UE6 522 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 FAM131BQ86XD5 332 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ZBTB8OSQ8IWT0 167 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF321PQ8N8H1 164 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 RNFT2Q96EX2 444 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 CMTM7Q96FZ5 175 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 AMDHD1Q96NU7 426 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 S100A13Q99584 98 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DOHHQ9BU89 302 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 TMED9Q9BVK6 235 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM100Q9NV29 134 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 ZSCAN32Q9NX65 697 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 DSPPQ9NZW4 1301 aa10.03□□□□□ -0.8
LINC00342-202ENST00000448494 LNP1A1A4G5 178 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF705EA8MWA4 302 aaPredicted RBP10.02□□□□□ -0.8
LINC00342-202ENST00000448494 M0R143 59 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 CYTIPO60759 359 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 CILPO75339 1184 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 FARS2O95363 451 aaKnown RBP10.02□□□□□ -0.8
LINC00342-202ENST00000448494 PRPS1L1P21108 318 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 FGF7P21781 194 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 MPZP25189 248 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 GDI1P31150 447 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 CCR4P51679 360 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 TDGF1P3P51864 188 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 MVDP53602 400 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 RING1Q06587 406 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 SLBPQ14493 270 aaKnown RBP eCLIP10.02□□□□□ -0.8
LINC00342-202ENST00000448494 C14orf28Q4W4Y0 310 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 MESTQ5EB52 335 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 SLC25A30Q5SVS4 291 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 C12orf73Q69YU5 71 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 IL27RAQ6UWB1 636 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 GAREM2Q75VX8 874 aa10.02□□□□□ -0.8
LINC00342-202ENST00000448494 PIM3Q86V86 326 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms