RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TAS1R1Q7RTX1 841 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 METTL4Q8N3J2 472 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
PTPN3-204ENST00000446349 TM7SF3Q9NS93 570 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 FGF21Q9NSA1 209 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 ARMC1Q9NVT9 282 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 MARCH5Q9NX47 278 aa8.02□□□□□ -1.13
PTPN3-204ENST00000446349 ZBTB42B2RXF5 422 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ENPP1P22413 925 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 GPR4P46093 362 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 SLC6A11P48066 632 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CEBPGP53567 150 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 SH3BP2P78314 561 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 MSMO1Q15800 293 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CDNFQ49AH0 187 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 GSG1LQ6UXU4 331 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF480Q8WV37 535 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ANKRD19PQ9H560 264 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 KCNK12Q9HB15 430 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 TBCCD1Q9NVR7 557 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 HHLA2Q9UM44 414 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 UBFD1O14562 309 aaKnown RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 TOR1AO14656 332 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 AKR1C2P52895 323 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 SLC26A5P58743 744 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 KCNAB2Q13303 367 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 TMPRSS9Q7Z410 1059 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 OR8J2Q8NGG1 315 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 DHRS4Q9BTZ2 278 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 C1orf198Q9H425 327 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 FOLH1BQ9HBA9 442 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 OR52A4PA6NMU1 304 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 GABRR3A8MPY1 467 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CREBL2O60519 120 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 EIF4E2O60573 245 aaKnown RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 RP2O75695 350 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CAV3P56539 151 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 RAB40BQ12829 278 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ELAVL1Q15717 326 aaKnown RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CPNE8Q86YQ8 564 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF566Q969W8 418 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 APIPQ96GX9 242 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 IL20RAQ9UHF4 553 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF223Q9UK11 482 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 POLHQ9Y253 713 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 POLR2AP24928 1970 aaKnown RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 HIDE1A8MVS5 230 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 RGS11O94810 467 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 LAMP1P11279 417 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CREB1P16220 341 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 STK11Q15831 433 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 TRIM73Q86UV7 250 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CARFQ8N187 725 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 GLIS1Q8NBF1 620 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 PBDC1Q9BVG4 233 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 AMBNQ9NP70 447 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 EXTL2Q9UBQ6 330 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 NDRG3Q9UGV2 375 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 FER1L6Q2WGJ9 1857 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 SOX2P48431 317 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF81P51508 661 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 AFMIDQ63HM1 303 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 NRMQ8IXM6 262 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 BOLLQ8N9W6 283 aaKnown RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 ADOQ96SZ5 270 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 PLEKHA3Q9HB20 300 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 KLHL9Q9P2J3 617 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 TBX21Q9UL17 535 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 NOSIPQ9Y314 301 aaKnown RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 MRPL3P09001 348 aaKnown RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 S100A2P29034 98 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 CCR7P32248 378 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 NAA10P41227 235 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-204ENST00000446349 DCBLD2Q96PD2 775 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 STACQ99469 402 aa8.01□□□□□ -1.13
PTPN3-204ENST00000446349 TNRC6CQ9HCJ0 1690 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 SMCO3A2RU48 225 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 AGAP5A6NIR3 686 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 CSNK1EP49674 416 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 ZC3HAV1Q7Z2W4 902 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 KIF18BQ86Y91 864 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SGPP2Q8IWX5 399 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PM20D2Q8IYS1 436 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SARAFQ96BY9 339 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF583Q96ND8 569 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 CHIAQ9BZP6 476 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 UCKL1Q9NWZ5 548 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 CACFD1Q9UGQ2 172 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 PRRC2BQ5JSZ5 2229 aaKnown RBP8□□□□□ -1.13
PTPN3-204ENST00000446349 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 GPRIN2O60269 458 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ADAM23O75077 832 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 TBX10O75333 385 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 SFTPCP11686 197 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 MAN2A2P49641 1150 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 TPMTP51580 245 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF684Q5T5D7 378 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 LETMD1Q6P1Q0 360 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 OR4N2Q8NGD1 307 aa8□□□□□ -1.13
PTPN3-204ENST00000446349 OR51T1Q8NGJ9 327 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms