RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OR8S1Q8NH09 359 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 GOT1L1Q8NHS2 421 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-206ENST00000445265 MSANTD3Q96H12 275 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-206ENST00000445265 LDB3O75112 727 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 PTBP1P26599 531 aaKnown RBP eCLIP15.55■□□□□ 0.08
TCOF1-206ENST00000445265 DDOSTP39656 456 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 IHHQ14623 411 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.55■□□□□ 0.088e-7■■□□□ 13.2
TCOF1-206ENST00000445265 GFOD2Q3B7J2 385 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 METTL27Q8N6F8 245 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ALG14Q96F25 216 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ATG5Q9H1Y0 275 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 PTTG3PQ9NZH4 202 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 SH2B3Q9UQQ2 575 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ZNF726A6NNF4 738 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 K7ESM1 405 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 HOXC11O43248 304 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-206ENST00000445265 PAHP00439 452 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 NR2C1P13056 603 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 PGCP20142 388 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 C1orf61Q13536 156 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 DUSP6Q16828 381 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ELP4Q96EB1 424 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 OR2M2Q96R28 347 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 SLC6A15Q9H2J7 730 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ALG5Q9Y673 324 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 TRAV27A0A087WT01 109 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 PRSS38A1L453 326 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 CD3GP09693 182 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 PNMTP11086 282 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 OR6C4Q8NGE1 309 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 MYADMQ96S97 322 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 CSF3RQ99062 836 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 A0A0J9YY10 115 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 SLC43A1O75387 559 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 NCR1O76036 304 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 OPRD1P41143 372 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 HHEXQ03014 270 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 KIF18BQ86Y91 864 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ZDHHC12Q96GR4 267 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 COQ10AQ96MF6 247 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 ARL6Q9H0F7 186 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 POLE3Q9NRF9 147 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 SIRT5Q9NXA8 310 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 SERTAD3Q9UJW9 196 aa15.55■□□□□ 0.08
TCOF1-206ENST00000445265 FARSAQ9Y285 508 aaKnown RBP15.55■□□□□ 0.08
TCOF1-206ENST00000445265 GON4LQ3T8J9 2241 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 TCRBV21S2A2A0A5A6 115 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 GPRIN2O60269 458 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 TRIM23P36406 574 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 ASAH1Q13510 395 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 EFR3AQ14156 821 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 FAM78AQ5JUQ0 283 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 EIF5AL1Q6IS14 154 aaKnown RBP15.54■□□□□ 0.08
TCOF1-206ENST00000445265 SLC7A6Q92536 515 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 DAZLQ92904 295 aaKnown RBP15.54■□□□□ 0.08
TCOF1-206ENST00000445265 OPALINQ96PE5 141 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 SEC61A2Q9H9S3 476 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 LRIT2A6NDA9 550 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 MAS1P04201 325 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 GYPBP06028 91 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 GJA4P35212 333 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 CTBSQ01459 385 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 DEFA5Q01523 94 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 CCINQ13939 588 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 MMP21Q8N119 569 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 DNAJC5GQ8N7S2 189 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 ALOXE3Q9BYJ1 711 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 PCDHGA3Q9Y5H0 932 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 CD160O95971 181 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 RLN2P04090 185 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 PCMT1P22061 227 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 S100GP29377 79 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 ACTBP60709 375 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 ACTG1P63261 375 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 SERTAD2Q14140 314 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 ANKRD33Q7Z3H0 272 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 TM9SF4Q92544 642 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 CMKLR1Q99788 373 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 NIPAL2Q9H841 368 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 PLEKHA6Q9Y2H5 1048 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 A0A087WUU8 490 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 ACOT7O00154 380 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 PRKRAO75569 313 aaKnown RBP15.54■□□□□ 0.08
TCOF1-206ENST00000445265 GIFP27352 417 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 RABIFP47224 123 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 RRAS2P62070 204 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-206ENST00000445265 SLC6A19Q695T7 634 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 GDF7Q7Z4P5 450 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 OR13C2Q8NGS9 318 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 CCL27Q9Y4X3 112 aa15.54■□□□□ 0.08
TCOF1-206ENST00000445265 A0A1B0GVC2 190 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 A6NIN4 97 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 RDH16O75452 317 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 RORAP35398 523 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ETV5P41161 510 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 BCL6P41182 706 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 ETV1P50549 477 aa15.53■□□□□ 0.08
TCOF1-206ENST00000445265 RIDAP52758 137 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms