RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ARSGQ96EG1 525 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 WDYHV1Q96HA8 205 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 TMEM19Q96HH6 336 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 DMRTA2Q96SC8 542 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 TREX2Q9BQ50 279 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 SPATA5L1Q9BVQ7 753 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 SPATA9Q9BWV2 254 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 BCL2L10Q9HD36 194 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 MED17Q9NVC6 651 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 KCNE5Q9UJ90 142 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 ICAM5Q9UMF0 924 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 GPC6Q9Y625 555 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-211ENST00000443563 PCNX3Q9H6A9 2034 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 DSPPQ9NZW4 1301 aa9.81□□□□□ -0.84
HDAC6-211ENST00000443563 LOC100653049A0A140TA62 436 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 H0Y3Z8 333 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 FBP2O00757 339 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ZG16O60844 167 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CYP7B1O75881 506 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 KRT34O76011 436 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 EPPINO95925 133 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ETS2P15036 469 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CD1EP15812 388 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 TCEA1P23193 301 aaKnown RBP9.8□□□□□ -0.84
HDAC6-211ENST00000443563 SLC6A2P23975 617 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ELK4P28324 431 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 PGM1P36871 562 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CCR4P51679 360 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 RPS3AP61247 264 aaKnown RBP9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CDK6Q00534 326 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 SKP2Q13309 424 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CYP51A1Q16850 503 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 TMEM44Q2T9K0 475 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ACSF3Q4G176 576 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-211ENST00000443563 REP15Q6BDI9 236 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CBLN3Q6UW01 205 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ARSKQ6UWY0 536 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 C3P1Q6ZMU1 363 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 OLIG3Q7RTU3 272 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 MRGPRGQ86SM5 289 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 LACC1Q8IV20 430 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 FAM71CQ8NEG0 241 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 BHLHE22Q8NFJ8 381 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-211ENST00000443563 OR8J3Q8NGG0 315 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 OR52P1PQ8NH57 321 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 GPR119Q8TDV5 335 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ASB5Q8WWX0 329 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ST8SIA1Q92185 356 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 LRRC58Q96CX6 371 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ZG16BQ96DA0 208 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CMTM5Q96DZ9 223 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 MRGPRX4Q96LA9 322 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF607Q96SK3 696 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 TTYH2Q9BSA4 534 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CCDC106Q9BWC9 280 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 RUBCNLQ9H714 662 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 CALHM2Q9HA72 323 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 FAM53CQ9NYF3 392 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ARMCX1Q9P291 453 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 AP3M1Q9Y2T2 418 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ARL2BPQ9Y2Y0 163 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF337Q9Y3M9 751 aa9.8□□□□□ -0.84
HDAC6-211ENST00000443563 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 CENPVL1A0A0U1RR11 272 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 PRORSD1PA6NEY8 169 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 CD8B2A6NJW9 211 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 GJE1A6NN92 205 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 H3BML4 177 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 DCTN3O75935 186 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 PGM3O95394 542 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 NUDT7P0C024 238 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 LINGO3P0C6S8 592 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 UBTFL6P0CB48 400 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-211ENST00000443563 COX4I1P13073 169 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF708P17019 499 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 PRDX6P30041 224 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 RNF144AP50876 292 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-211ENST00000443563 MTPNP58546 118 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 RAC1P63000 192 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 SRYQ05066 204 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 PMPCAQ10713 525 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 SCARB2Q14108 478 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 QPRTQ15274 297 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 MAPK11Q15759 364 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 SLC25A53Q5H9E4 307 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 DCST1Q5T197 706 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 PDSS1Q5T2R2 415 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 RIPPLY2Q5TAB7 128 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 RNF220Q5VTB9 566 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 NSUN5P2Q63ZY6 315 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 NANOGP8Q6NSW7 305 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 ARPINQ7Z6K5 226 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 PIGWQ7Z7B1 504 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 SERPINA11Q86U17 422 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 GRAMD2AQ8IUY3 354 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 C11orf65Q8NCR3 313 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 HIPK4Q8NE63 616 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 OR10Q1Q8NGQ4 319 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 NFKBIDQ8NI38 313 aa9.79□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF563Q8TA94 476 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms