RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 RABL3Q5HYI8 236 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 DCST1Q5T197 706 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 ENPP6Q6UWR7 440 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 SERPINA11Q86U17 422 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 VRK2Q86Y07 508 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 PTOV1Q86YD1 416 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 CMIPQ8IY22 773 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 PM20D2Q8IYS1 436 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 C11orf65Q8NCR3 313 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 CCDC197Q8NCU1 140 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 OR8J3Q8NGG0 315 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 OR10A6Q8NH74 314 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 CNOT9Q92600 299 aaKnown RBP11.16□□□□□ -0.62
USP1-203ENST00000442679 ZBTB8AQ96BR9 441 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 ARSGQ96EG1 525 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 WDYHV1Q96HA8 205 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 ECSITQ9BQ95 431 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 PIF1Q9H611 641 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 MEMO1Q9Y316 297 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 IFT52Q9Y366 437 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 ZNF337Q9Y3M9 751 aa11.16□□□□□ -0.62
USP1-203ENST00000442679 RP1L1Q8IWN7 2480 aaPredicted RBP11.16□□□□□ -0.62
USP1-203ENST00000442679 CLEC18AA5D8T8 446 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 FIGNL2A6NMB9 653 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 E9PLN8 166 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 WDR1O75083 606 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 HOXD4P09016 255 aaPredicted RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 GABRA1P14867 456 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 ETS2P15036 469 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 CPN1P15169 458 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 PGCP20142 388 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 POU3F2P20265 443 aaPredicted RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 ACVR2AP27037 513 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 EIF1P41567 113 aaKnown RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 LHX2P50458 406 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 GZMMP51124 257 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 PER3P56645 1201 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 SRYQ05066 204 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 RBBP4Q09028 425 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 ART3Q13508 389 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 TOMM34Q15785 309 aaPredicted RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 BCL2A1Q16548 175 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 ZNF311Q5JNZ3 666 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 MTFR2Q6P444 385 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 CLEC18BQ6UXF7 455 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 NET1Q7Z628 596 aaPredicted RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 KRT73Q86Y46 540 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 ZZZ3Q8IYH5 903 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 ULK2Q8IYT8 1036 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 EID3Q8N140 333 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 GTPBP8Q8N3Z3 284 aaPredicted RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 CLEC18CQ8NCF0 446 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 HIPK4Q8NE63 616 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 FAM71CQ8NEG0 241 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 POC1BQ8TC44 478 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 NPAS1Q99742 590 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 HOPXQ9BPY8 73 aaPredicted RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 VKORC1Q9BQB6 163 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 GPATCH1Q9BRR8 931 aaKnown RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 SPATA9Q9BWV2 254 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 PRDM14Q9GZV8 571 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 EXOSC3Q9NQT5 275 aaKnown RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 RLIMQ9NVW2 624 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 DNAJB12Q9NXW2 375 aaKnown RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 ZNF443Q9Y2A4 671 aaPredicted RBP11.15□□□□□ -0.62
USP1-203ENST00000442679 NCKAP5O14513 1909 aa11.15□□□□□ -0.62
USP1-203ENST00000442679 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
USP1-203ENST00000442679 C7orf72A4D263 438 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 AHRRA9YTQ3 701 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 DNAJA2O60884 412 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 THBS1P07996 1170 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 PABPC4LP0CB38 370 aaKnown RBP11.14□□□□□ -0.63
USP1-203ENST00000442679 PEPDP12955 493 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 ZNF17P17021 662 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 AQP1P29972 269 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 RYKP34925 604 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 PTGER4P35408 488 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 SLC6A8P48029 635 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 NUDT2P50583 147 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 EEF1A1P68104 462 aaKnown RBP11.14□□□□□ -0.63
USP1-203ENST00000442679 PLAURQ03405 335 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 QPRTQ15274 297 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 SF3B4Q15427 424 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP1-203ENST00000442679 ZSWIM7Q19AV6 140 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 MRPL2Q5T653 305 aaKnown RBP11.14□□□□□ -0.63
USP1-203ENST00000442679 C1orf185Q5T7R7 199 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 TMEM211Q6ICI0 200 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 HACD2Q6Y1H2 254 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 ZNF836Q6ZNA1 936 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 CALHM3Q86XJ0 350 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 UBQLNLQ8IYU4 475 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 CLIP4Q8N3C7 705 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 FBXO27Q8NI29 283 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 ZNF524Q96C55 264 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 CCDC120Q96HB5 630 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 RNF145Q96MT1 663 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 DMRTA2Q96SC8 542 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 ZNF607Q96SK3 696 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 SPATA5L1Q9BVQ7 753 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms