RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 NEDD8Q15843 81 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 NDUFAF6Q330K2 333 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 SLC25A30Q5SVS4 291 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 HLA-DQA1Q5Y7H0 255 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 PTCHD4Q6ZW05 846 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 TMPRSS11FQ6ZWK6 438 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 GPR141Q7Z602 305 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 NAXDQ8IW45 347 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 ZNF440Q8IYI8 595 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 SLC34A3Q8N130 599 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 CLDN22Q8N7P3 220 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 ZNF527Q8NB42 609 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 OR8J1Q8NGP2 316 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 OR13F1Q8NGS4 319 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 METTL21AQ8WXB1 218 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 MPP4Q96JB8 637 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 HS6ST2Q96MM7 605 aa17.23■□□□□ 0.35
POLR1E-203ENST00000442009 MEPEQ9NQ76 525 aaPredicted RBP17.23■□□□□ 0.35
POLR1E-203ENST00000442009 EXOSC3Q9NQT5 275 aaKnown RBP17.23■□□□□ 0.35
POLR1E-203ENST00000442009 CLCA1A8K7I4 914 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 ABCD3P28288 659 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 PNLIPRP2P54317 469 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 SKP2Q13309 424 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 DESI1Q6ICB0 168 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 ULK3Q6PHR2 472 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 KIRREL2Q6UWL6 708 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 PRSS48Q7RTY5 328 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 CPEB2Q7Z5Q1 589 aaKnown RBP17.22■□□□□ 0.35
POLR1E-203ENST00000442009 PRR22Q8IZ63 422 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 IQCF1Q8N6M8 205 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 GGHQ92820 318 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 CRB3Q9BUF7 120 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 POLDIP3Q9BY77 421 aaKnown RBP17.22■□□□□ 0.35
POLR1E-203ENST00000442009 C20orf141Q9NUB4 165 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 NXT1Q9UKK6 140 aaKnown RBP17.22■□□□□ 0.35
POLR1E-203ENST00000442009 EXPH5Q8NEV8 1989 aa17.22■□□□□ 0.35
POLR1E-203ENST00000442009 OIP5O43482 229 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 RGS10O43665 173 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 REM1O75628 298 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 RBM34P42696 430 aaKnown RBP17.21■□□□□ 0.35
POLR1E-203ENST00000442009 SLC15A1P46059 708 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 GPR4P46093 362 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 PAPD4Q6PIY7 484 aaKnown RBP17.21■□□□□ 0.35
POLR1E-203ENST00000442009 FAM198BQ6UWH4 519 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 ZNF620Q6ZNG0 422 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 FAM26EQ8N5C1 309 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 MUL1Q969V5 352 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 CMKLR1Q99788 373 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 RTN4RQ9BZR6 473 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 SLC39A1Q9NY26 324 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 SNX5Q9Y5X3 404 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 CFAP54Q96N23 3096 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 PCNX2A6NKB5 2137 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 LOC102723996A0A087X1L8 192 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 A0A1W2PQD3 144 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 TMEM200CA6NKL6 621 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 SCDO00767 359 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 ICOSLGO75144 302 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 KLK3P07288 261 aaPredicted RBP17.21■□□□□ 0.35
POLR1E-203ENST00000442009 MAKP20794 623 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 MASP1P48740 699 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 SMSP52788 366 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 TUBA3CQ13748 450 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 OCLNQ16625 522 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 CDCP2Q5VXM1 449 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 SLC27A4Q6P1M0 643 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 FAM199XQ6PEV8 388 aaPredicted RBP17.21■□□□□ 0.35
POLR1E-203ENST00000442009 CASP12Q6UXS9 341 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 HSDL2Q6YN16 418 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 LSRQ86X29 649 aaPredicted RBP17.21■□□□□ 0.35
POLR1E-203ENST00000442009 OR8K3Q8NH51 312 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 PFN4Q8NHR9 129 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 NUBPLQ8TB37 319 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 GRHL3Q8TE85 626 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 FAR1Q8WVX9 515 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 OMA1Q96E52 524 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 IL4I1Q96RQ9 567 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 VCX3AQ9NNX9 186 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 AMBNQ9NP70 447 aa17.21■□□□□ 0.35
POLR1E-203ENST00000442009 KRCC1Q9NPI7 259 aaPredicted RBP17.21■□□□□ 0.35
POLR1E-203ENST00000442009 ADAM10O14672 748 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 RFPL3O75679 317 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 KLF7O75840 302 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-203ENST00000442009 MT-ND2P03891 347 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 UBL4AP11441 157 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 PCYT1AP49585 367 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 INSM1Q01101 510 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-203ENST00000442009 ALG10BQ5I7T1 473 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 CBLN3Q6UW01 205 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 AHSA2Q719I0 299 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 OSTF1Q92882 214 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 VMP1Q96GC9 406 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 PHOX2BQ99453 314 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 LPAR4Q99677 370 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 COPS4Q9BT78 406 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 LHPPQ9H008 270 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 CXorf56Q9H5V9 222 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 ATP13A2Q9NQ11 1180 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 CLN6Q9NWW5 311 aa17.2■□□□□ 0.34
POLR1E-203ENST00000442009 MED31Q9Y3C7 131 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms