RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MAGEB18Q96M61 343 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 TRIM51Q9BSJ1 452 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 RNF186Q9NXI6 227 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 OR52A1Q9UKL2 312 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ACTL7BQ9Y614 415 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ADGRA2Q96PE1 1338 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 FRMPD3Q5JV73 1810 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 DNAH12Q6ZR08 3092 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 C2orf78A6NCI8 922 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 SIGLEC16A6NMB1 481 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 TCP10L2B9ZVM9 353 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 OR10H2O60403 315 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ZWINTO95229 277 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CELA3BP08861 270 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 PMELP40967 661 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CYB561P49447 251 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ACOT2P49753 483 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 MTM1Q13496 603 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CTTNQ14247 550 aaKnown RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 MICBQ29980 383 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM211Q6ICI0 200 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 DPY19L2P2Q6ZN68 376 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ZNF595Q8IYB9 648 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 KIF2BQ8N4N8 673 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 SMG8Q8ND04 991 aaKnown RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 OR2V2Q96R30 315 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 OR2A14Q96R47 310 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CMKLR1Q99788 373 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 DCLRE1BQ9H816 532 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 UBTD1Q9HAC8 227 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 SMPD4Q9NXE4 827 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 GNPTGQ9UJJ9 305 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 PCDHB7Q9Y5E2 793 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 LEUTXA8MZ59 168 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 INPP4BO15327 924 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 RS1O15537 224 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 PSMG1O95456 288 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CBX6O95503 412 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 TTC4O95801 387 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ITGB2P05107 769 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ACP5P13686 325 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 COX7A2P14406 83 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 EDN2P20800 178 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 GKP32189 559 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CA5AP35218 305 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 IDH3GP51553 393 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 EFNB1P98172 346 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CDK10Q15131 360 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 EFNB3Q15768 340 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 C9orf64Q5T6V5 341 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 UGT3A1Q6NUS8 523 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 SLC16A13Q7RTY0 426 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM199Q8N511 208 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 OR9G4Q8NGQ1 327 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 FBXO25Q8TCJ0 367 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 LINC01599Q8WXQ3 324 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 GCDHQ92947 438 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 MCHR2Q969V1 340 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 TEPSINQ96N21 525 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 BIRC8Q96P09 236 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ALKBH3Q96Q83 286 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 STACQ99469 402 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 RBBP8Q99708 897 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 DEFB129Q9H1M3 183 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 CLEC4MQ9H2X3 399 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 ACSS1Q9NUB1 689 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 NECAP2Q9NVZ3 263 aa9.76□□□□□ -0.85
SYNE2-206ENST00000441438 GMPR2Q9P2T1 348 aaKnown RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 PRPF19Q9UMS4 504 aaKnown RBP9.76□□□□□ -0.85
SYNE2-206ENST00000441438 PLXNB2O15031 1838 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 A0A087X1B8 175 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 F5H6K3 240 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 EIF3GO75821 320 aaKnown RBP eCLIP9.75□□□□□ -0.85
SYNE2-206ENST00000441438 PGAM1P18669 254 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 C16orf72Q14CZ0 275 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 VAMP3Q15836 100 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 C14orf28Q4W4Y0 310 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 SYT6Q5T7P8 510 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CGB2Q6NT52 195 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM135Q86UB9 458 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CATSPER3Q86XQ3 398 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CPXM2Q8N436 756 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 TRMT10AQ8TBZ6 339 aaKnown RBP9.75□□□□□ -0.85
SYNE2-206ENST00000441438 ART4Q93070 314 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 POM121L2Q96KW2 1035 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 GTPBP2Q9BX10 602 aaKnown RBP9.75□□□□□ -0.85
SYNE2-206ENST00000441438 NANSQ9NR45 359 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 ALKBH4Q9NXW9 302 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 GLS2Q9UI32 602 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 IGKV6D-41A0A0C4DH26 115 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 AGAP5A6NIR3 686 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 PDHXO00330 501 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 SDHDO14521 159 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 PMPCBO75439 489 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 NPSP0C0P6 89 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 SPI1P17947 270 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 MGAT1P26572 445 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 KLRC2P26717 231 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 PSMB4P28070 264 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 669.6 ms