RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ANKHD1Q8IWZ3 2542 aaKnown RBP16.45■□□□□ 0.22
SMPD4-210ENST00000441135 PCNX3Q9H6A9 2034 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 CSMD1Q96PZ7 3565 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 CCDC168Q8NDH2 2452 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 ARHGAP21Q5T5U3 1957 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 TRBV5-3A0A0A0MS03 114 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 NPIPA5A0A0B4J1W7 369 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 PRAMEF27A3QJZ7 478 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 SERINC4A6NH21 518 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 NPIPA7E9PJI5 369 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 HCRTR2O43614 444 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 NPIPA8P0DM63 369 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 CTSSP25774 331 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 UQCRC1P31930 480 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 P2RX1P51575 399 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 ZNF41P51814 821 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-210ENST00000441135 CASP9P55211 416 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 CLDN18P56856 261 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 ZNF117Q03924 483 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 GPR68Q15743 365 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 PLPPR5Q32ZL2 321 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 GTDC1Q4AE62 458 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 COX20Q5RI15 118 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 PDZK1Q5T2W1 519 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 RAET1LQ5VY80 246 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 POMZP3Q6PJE2 187 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 ADGRE4PQ86SQ3 457 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 DPP10Q8N608 796 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 GATSQ8NAP1 163 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 TUBA1CQ9BQE3 449 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 SLC38A1Q9H2H9 487 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 STOML1Q9UBI4 398 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 P2RX2Q9UBL9 471 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 KCNE5Q9UJ90 142 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 LEF1Q9UJU2 399 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-210ENST00000441135 MKLN1Q9UL63 735 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 SLC35A3Q9Y2D2 325 aa16.44■□□□□ 0.22
SMPD4-210ENST00000441135 OR2M5A3KFT3 312 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 CLIC1O00299 241 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 ETV2O00321 342 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-210ENST00000441135 ZNF264O43296 627 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 DNAJA2O60884 412 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 TNFRSF21O75509 655 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 H6PDO95479 791 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 C1QCP02747 245 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 UBL4AP11441 157 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 ADH6P28332 368 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 ADSLP30566 484 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-210ENST00000441135 EIF1P41567 113 aaKnown RBP16.43■□□□□ 0.22
SMPD4-210ENST00000441135 KIR2DL3P43628 341 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 SRYQ05066 204 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 GNA13Q14344 377 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 FGFBP1Q14512 234 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 GPAT3Q53EU6 434 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 PRAMEF8Q5VWM4 474 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 PRAMEF7Q5VXH5 474 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 EIF3MQ7L2H7 374 aaKnown RBP16.43■□□□□ 0.22
SMPD4-210ENST00000441135 TMEM200AQ86VY9 491 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 CMIPQ8IY22 773 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 C9orf106Q8NAJ2 232 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 FAM71CQ8NEG0 241 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 WNT2BQ93097 391 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 LAT2Q9GZY6 243 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 MED17Q9NVC6 651 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 PRDM4Q9UKN5 801 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 CORO2BQ9UQ03 480 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 RPH3AQ9Y2J0 694 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-210ENST00000441135 AP4B1Q9Y6B7 739 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 DSPPQ9NZW4 1301 aa16.43■□□□□ 0.22
SMPD4-210ENST00000441135 CLCA1A8K7I4 914 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 GTPBP1O00178 669 aaKnown RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 CHRM4P08173 479 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 LINGO3P0C6S8 592 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 TMIGD3P0DMS9 266 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 RPS4Y1P22090 263 aaKnown RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 ELK4P28324 431 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 CRATP43155 626 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 EEFSECP57772 596 aaKnown RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 DSTNP60981 165 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 RGNQ15493 299 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 PAGE3Q5JUK9 113 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 MSRB3Q8IXL7 192 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 METTL25Q8N6Q8 603 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 OR5W2Q8NH69 310 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 PNPT1Q8TCS8 783 aaKnown RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 AURKBQ96GD4 344 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 SH3YL1Q96HL8 342 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 SFXN3Q9BWM7 321 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 MTHFD2LQ9H903 347 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 EXOSC3Q9NQT5 275 aaKnown RBP16.42■□□□□ 0.22
SMPD4-210ENST00000441135 SLC25A37Q9NYZ2 338 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 CLCF1Q9UBD9 225 aa16.42■□□□□ 0.22
SMPD4-210ENST00000441135 CSMD2Q7Z408 3487 aa16.41■□□□□ 0.22
SMPD4-210ENST00000441135 TMEM247A6NEH6 219 aa16.41■□□□□ 0.22
SMPD4-210ENST00000441135 AGAP5A6NIR3 686 aa16.41■□□□□ 0.22
SMPD4-210ENST00000441135 EEF1E1-BLOC1S5C9J1V9 151 aa16.41■□□□□ 0.22
SMPD4-210ENST00000441135 SLC22A2O15244 555 aa16.41■□□□□ 0.22
SMPD4-210ENST00000441135 EEF1E1O43324 174 aaKnown RBP16.41■□□□□ 0.22
SMPD4-210ENST00000441135 CSTAP01040 98 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms